Carassius gibelio (silver crucian carp): 127952111
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Entry
127952111 CDS
T08819
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04136
Autophagy - other
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127952111
04136 Autophagy - other
127952111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127952111
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127952111
Membrane trafficking [BR:
cgib04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
127952111
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127952111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
BCAS3_WD40
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
RMC1_N
Motif
Other DBs
NCBI-GeneID:
127952111
NCBI-ProteinID:
XP_052406362
LinkDB
All DBs
Position
B3:complement(16747374..16758771)
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AA seq
444 aa
AA seq
DB search
METGDVGPGLCCASFNQDSTSLAVGTKTGYRLFSVTSVDKLDCIHESIETPDVYIVERLF
SSSLVVVVSQSVPRRMNVYHFKKGTEICNYSYSNNILAVRLNRQRLVVCLEESIYIHNIK
DMKLLKTLLNTPSNPSGLCALSINHSNSFLAYPGSDTIGEIIVYDANNLSTVTMIPAHDS
PLAAVTFSASGTKLASASERGTVIRVFSIPEGLRLFEFRRGMKRYVNISSLSFSPDAQFL
CASSNTETVHIFKLEQHSPSGEEEAPSWSAYVGKMFTAASSYLPAQVSGMMSQDRAFATV
RLQMAGQKNACALAIIQKLPRLLVASSDGQLFIYNIDPQDGGECTLVQKHRLFGSDKDWE
ETEKSQLTEPAQACQSYAATVAIPTSGPVTATLTGYSEDGGAKKGEVIPEHEFAAGPVCL
DDETEFPPINWCRDGSGRGKGRRP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggagatgttgggccggggctgtgctgcgcctccttcaaccaggactccacg
tctttggctgtgggcaccaaaactggatacaggctattctctgtgacctcggtggacaaa
ctggactgcattcatgagagcatagaaactccagacgtgtatatcgtggaaaggcttttc
tccagcagcctggttgtggtggtgagtcagtccgtgccacgtcgcatgaatgtctaccac
ttcaaaaagggcacagagatctgcaactacagctactcgaacaacattcttgcagtgcgt
ctaaacagacagagactggttgtctgtctggaggaatccatttatatccacaatataaaa
gacatgaaactcctgaagacccttcttaacacaccctccaacccatcaggtctctgtgct
ctctccatcaaccattccaactctttcctggcatatccaggaagtgacaccatcggagaa
attattgtctatgatgccaacaatctgagcactgtgaccatgattccagctcatgacagt
ccactggccgccgtcaccttcagcgcttctggcaccaaactggccagtgcttctgagagg
ggcacagtgattcgtgtcttctccattccagagggactgcgcttgtttgagttccggcgc
gggatgaaaaggtatgtcaacatcagctccctttccttcagcccggatgctcagttcctc
tgtgcctcaagcaatacagagacggtgcacattttcaagcttgaacagcacagcccaagt
ggggaggaggaagctccctcttggtcagcatatgtaggtaagatgttcacagcagccagt
agctacctcccagcgcaggtgtcaggcatgatgagtcaagacagagcctttgccaccgtc
cggctccagatggccggtcagaagaatgcctgcgccctggcaataatccagaagcttcca
cgtctgcttgtggcctcctctgatgggcagctattcatctataacattgatcctcaagat
gggggtgaatgcactctggtgcagaagcacaggttgtttggctcagataaggactgggag
gagactgagaaatcccaactcacggagccagcgcaagcatgccagtcctatgctgcaacc
gtggccatccccacctccggacccgtcacagccactctcacaggctactcggaggacggc
ggagctaagaagggtgaggtgattcccgagcacgagtttgcagcagggcctgtgtgtctg
gacgacgaaactgaatttcctcccataaattggtgccgtgacggatctgggcgaggcaag
gggagacgaccgtga
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