Carassius gibelio (silver crucian carp): 127952527
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Entry
127952527 CDS
T08819
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127952527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127952527
03036 Chromosome and associated proteins [BR:
cgib03036
]
127952527
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127952527
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127952527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
P2_Phage_GpR
Motif
Other DBs
NCBI-GeneID:
127952527
NCBI-ProteinID:
XP_052407012
LinkDB
All DBs
Position
B3:complement(6234641..6241719)
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AA seq
649 aa
AA seq
DB search
MEELDVEPSTTLIPGVGFHQKHLGFEWGPGDLLVYETNYRLQGPRSASSPLVHIVRRDED
ICSPILRKLFNESHLIFVGLQKLKEDVPSKNKKSQFVSVSKNYRSVIRACMEELQQNAVS
TREGSLASQYGDQVSILLAIELIWNLCEVLFIDAAPAGSLLLLLLDWVRLHKSDVDTRAR
EVLQSESPALHQSYWDVVISLVLQGRTDEARQVLSKQASLRAESSSVFKRMDGLLQSMPI
FNPAGTQTLTEFDVKWRHWHEECDRCLQDNTFASSRQLETICKILVGDEDTLLEQKELLS
TWYHFLVTRLLFTHPTIKPPDLHYYAQSSMNMFLGPRASPEPLDIILLSAFEFDLHQVIK
DCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKAIKVLRICEDRQMSEQVRSICKIMAKRALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYSNKGSFTDLDLLDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFSEAARLLLSLMTAKIAPRSLWMTLLTDALPLLEQKEVIFSVDQTYELMS
CLEELNLDSKDSNQTDQDEDIESTKTELLRLALARNLAMAIVKEGTIET
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggatgtagagcccagtaccacgctgattcccggcgttggatttcatcag
aagcacttgggttttgaatggggtcctggagatctgttggtttatgagacaaactacaga
ctacaaggtccgaggtctgccagctctccgctcgttcacatagtgaggagagatgaagac
atctgctctcccatcctgcgcaaactcttcaacgagtcccatctcatcttcgtggggctg
cagaaactcaaagaggatgtgcccagcaagaacaagaagtcacagtttgtgagcgtcagt
aagaactacaggtctgtgatccgagcgtgtatggaggagctgcagcagaacgcagtttca
actcgagagggttcgttagcgtcacagtatggagatcaggtctctattctcttggcgatc
gagctcatatggaacttgtgtgaggttctgttcatcgacgcagcgccagccggatctctg
ctgctcctcctgctggattgggtgcgtctgcacaagtcggatgtggacacaagagcaaga
gaggtgttacagagcgaaagccctgccctgcatcagtcctactgggatgtggtgatcagt
ttggtcctgcagggccgtacggatgaagcccgtcaggtgctgtccaaacaggcatctctt
cgggccgagagcagctctgtgttcaaacgcatggacggcctgttacagagcatgcccatc
tttaaccccgcaggaactcaaacgctgactgagtttgatgtcaaatggagacactggcac
gaggagtgtgaccgctgtctacaagacaacaccttcgctagcagccgtcagctggagacc
atctgcaagatcctggtgggtgatgaggacacgttactggagcagaaagagctgctgagc
acctggtatcacttcctggtcacacggctgctcttcactcacccgacaatcaaaccgccc
gacctgcactactacgcacaatcgagcatgaacatgtttctgggtccacgggcgtctccg
gagcctctggacatcatcctgctgtcagcctttgagttcgacctgcatcaggtgatcaaa
gactgcagcatcgcgctcaacaactggtggttcgtggctcatctgacagacctgctggat
cactgcaaactcctgcagtcacacaacctccattttgggtctaatctgcgtgagtttctg
gttttggagtatgcctcgggactcttcacgcatcacagtctgtggcagctggcggtggat
tatttcgatcactgtcctgagttcggtcgtgtgtatctggagctgcagatcgagagagtc
ccgctcgacaccgaacgcaaagccattaaagtcctgcggatctgtgaggaccgacagatg
agtgaacaggtgcgcagtatctgtaagatcatggctaaaagagctctgaggaacaacaga
ctgggatctgctctgtcctggagcatcagagccaaagacgctgcgttcgctactctcatc
tccgagaggtttcttcaggattacagtaacaaaggctctttcacagatctggatttattg
gataatctgggtcccgccatgctgctcagtgacagactgacgtttttaggaaagtaccgt
gagtttcacaggctttacggtgagaagcgtttctccgaggcggccagactccttctgtcc
ctcatgacggcaaagatcgctccacgcagtctgtggatgaccctgctgaccgatgcgctg
cctctgctggagcagaaagaggtgatcttctcagtggatcagacgtatgagctcatgtcc
tgtctggaggagctgaacttagacagcaaagactcaaaccagacagaccaggatgaagat
atcgagtccacgaagacggagctcctgagactcgctctggcccgtaacctcgccatggcc
atcgtgaaagagggaacaatagaaacataa
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