Carassius gibelio (silver crucian carp): 127952529
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Entry
127952529 CDS
T08819
Name
(RefSeq) ran GTPase-activating protein 1a
KO
K14319
Ran GTPase-activating protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127952529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127952529
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127952529
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
CobT
Nop14
SDA1_dom
BUD22
DUF2457
Motif
Other DBs
NCBI-GeneID:
127952529
NCBI-ProteinID:
XP_052407014
LinkDB
All DBs
Position
B3:5617161..5938978
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AA seq
580 aa
AA seq
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MASDDVENLANSLAKTQVDESELSYKGQGLKLDNAQSVEKMVKEIEEFDGLRALRLEGNT
IGVEAAQTIAKALEKKSDLQCCHWSDMFTGRLRAEIPPALNSLGDALIMAGARLKVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTVCHKESSALGAPL
QLKVFIAGRNRLENDGATALAQAFQLIGSLEEVHMPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKRGAIAMAEALKHLRNVQVINFGDCLVRSEGASAIAETLKEGLPILKELNL
SFGEITEEAALEVARSVQHKDQFEKLDLNGNSFGEDGCDKLRDVMEKMNMADKLGSLSDD
EGEPEEDDDEEEDDDDDDDDDDDDDDEDVEEEEEEEEGEGEEENSELNQFSTPPSAPRTP
DVSSFLSFPSPDKLLRLGAKRSFLIQQQVDVSDVSKTVEAFLKISCVYKEDDADVKSAVL
ESIDAVLSKAFLTPSFQALSFMSSLLVMLGLLKSEDKLKPVKVVPGHLQCLEHAVKQSYF
PREHITVLNAFMARPNKSLEPCSSARDRLQSTLQKLTLES
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagatgatgtggaaaatctcgccaactcattggccaaaactcaagtcgatgag
agcgagctcagttataaaggacaaggccttaaactggacaacgctcagtctgtggagaag
atggtgaaggagattgaggagtttgacggtctgcgtgcgctcagactggagggaaacacc
atcggcgtggaggcagcgcaaaccatcgctaaagccctggagaagaagagcgacctgcag
tgctgccactggagcgacatgtttacgggccgcctgcgagctgagattcctccagcgttg
aattctctgggcgatgcgttaatcatggctggagctcggctgaaggttctggatctgagt
gataacgctttcggacctgatggtgtcaaagggattgagaagctgctcaagagcaccgcc
tgccacacactgcaggaactgcgtctgaacaactgtggaatgggcatcggaggaggaaag
atcctggcggcagctctgacggtgtgtcataaggagtcgagtgcacttggtgcccccttg
cagctgaaggtgttcatcgctggcaggaacagactggagaacgatggagctacagcgctg
gcgcaggctttccagttgattggcagtctagaggaagtgcacatgccccagaatgggatc
aatcacccaggagtcacagctttagccacagcaatgcagcacaacccacaactgcgtgtc
ctgaacctcaacgacaacactttcaccaagagaggagcgatcgccatggcagaggcattg
aaacacctgcgcaatgtgcaggtgataaattttggtgactgtcttgttcggtctgaagga
gccagtgccatagcagagaccctgaaagaaggactgccgatactaaaggagctgaatctg
tcttttggggaaatcacagaggaagctgcgttggaagtggctcgatccgtacagcataaa
gatcagtttgaaaaacttgacctgaatggtaacagtttcggtgaagacggctgtgataaa
ctgcgagatgtgatggagaagatgaacatggcagacaaactgggctctctgagtgatgac
gagggagaacctgaggaagatgacgatgaggaggaggacgatgacgacgatgatgatgat
gatgatgatgatgatgatgaagacgtggaggaagaagaggaagaggaggagggagaagga
gaggaagaaaatagtgaattaaaccagttctcaacgccgccttcagcgcctcgtactcca
gacgtctcctcgttcctgagctttccgtctccagacaaactcctgcgactcggtgcaaag
agaagcttcctcatccagcaacaggtggacgtgtcggacgtgagtaagacggtggaagcg
ttcctgaagatctcgtgtgtgtataaggaagacgacgcagatgtgaagtcagccgtgctg
gagagcatcgacgcagtgctgagtaaagccttcctcacaccctccttccaggccttgagt
ttcatgtcctcgttgctggtgatgctcgggctgttgaagagtgaagacaagctgaagccg
gtgaaagtcgtcccaggacatctacagtgtttggagcatgcagtgaaacagagttacttc
cctcgagaacacatcactgtgctgaacgctttcatggccaggccgaataagtctctggag
ccgtgcagcagtgctcgagatcgcctgcaatccaccctgcagaaactcacactggagagc
tga
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