Carassius gibelio (silver crucian carp): 127952567
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Entry
127952567 CDS
T08819
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127952567
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127952567
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127952567
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127952567
NCBI-ProteinID:
XP_052407151
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All DBs
Position
B3:complement(5728208..5733353)
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDDEPQGAPESAAPVGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVEGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKILNDVQDRFEVNVSELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgatgtcgacaacgagctgctggattatgaagaggatgatgagcctcaa
ggagccccagaaagtgccgctccggtgggcaagaaggaggtgaagggctcatacgtgtcc
atccacagctcgggcttcagggacttcctgctgaagccggagctgctgagggccatcgtg
gactgtggatttgagcatccatctgaagtgcagcacgagtgcatcccgcaggccatcctc
ggcatggatatcctgtgtcaggccaagtctggtatgggaaagaccgccgtgtttgtgctc
gctaccctgcagcagatcgagccggtcgaaggacaggtgtcggtgctggtcatgtgtcac
acacgcgagctggcgtttcagatcagtaaggagtacgagcgcttctccaagtacatgccc
acggtgaaggtggccgtgttcttcggtggcatgtccataaagaaggacgaggatgtcctg
aagaagagctgccctcacatcgtggtcggcacgccgggacgaatcctcgccctggtccga
aacaaaaccctcaacctgaagaacgtcaagcacttcgttctggacgagtgtgacaagatg
ctggagcagctggatatgagacgtgacgtgcaggacatcttcagactgacccctcacgag
aagcagtgcatgatgttcagcgccaccctcagcaaagagattcggcccgtctgccgcaag
ttcatgcaggacccgatggaggtgtttgtggacgatgagaccaagctgactcttcatggt
ctgcagcagtactactgcaaactgaaggacagcgagaagaaccgcaaactctttgacctg
ctcgacgtgctggagttcaaccaggtggtgatattcgtgaagtctgttcagcgttgtgtg
gcgctttcacagttactggtggagcagaacttccccgccatcgccatccacagaggaatg
gcacaggaagagaggttgtctcggtatcagcagttcaaagacttccagaggaggatccta
gtggccacaaacctgttcgggcgaggaatggatatcgagagggtcaacatcgtcttcaac
tacgacatgccggaggactctgacacgtatctccacagggtggctcgtgcgggtcgcttc
ggcaccaagggtttggccgtcacatttgtgtcagacgagacggacgccaagatcctgaac
gatgtgcaggaccgattcgaggtcaacgtgtctgagttaccagaggagatcgacatttcc
acttacattgaacagtccagatga
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