KEGG   Carassius gibelio (silver crucian carp): 127952709
Entry
127952709         CDS       T08819                                 
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03420  Nucleotide excision repair
cgib04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127952709
  09124 Replication and repair
   03420 Nucleotide excision repair
    127952709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    127952709
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127952709
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127952709
Ubiquitin system [BR:cgib04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     127952709
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      127952709
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      127952709
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127952709
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 127952709
NCBI-ProteinID: XP_052407742
LinkDB
Position
A1:17056442..17099346
AA seq 742 aa
MMAEDIQKSNFNGLTKSAKSGSSKKLVIKNFKDRPKLTDSYTEDTWMKLRDAVSAIQNST
SIKYNLEELYQAVENLCSYKVSPVLYKQLRQVCEDHVQAQIHQFREESLDSLSFLKRMNR
CWQDHCSQTIMIRSIFLFLDRTYILQNSLLPSIWDTGLELFRTHIVSDGAVQRRTVEGIL
EQIERERNGETVDRSLLRSLLGMLSDLQVYKDSFEQRFLSETNRLYAAEGQRLMQERDVP
EYLHHVARRLEEENDRVISYLDQSTQKPLIATVEKQLLGEHMNAILQKGLWMLLDENRVC
ELTLLYELLSKVKGGLMTLLQAWRDYIKSFGGEIVSSPEKDKELVQELLDFKDKMDHVTQ
RCFQRNETFINAMKEAFESFINKRPNKPAELIAKYVDSKLRAGNKEATEEELERILDKIM
IIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKD
MELSKDIMIQFKQYMQNQSDPSNIELTVNILTMGYWPSYTPMNVHLPAEMVKLQEVFKLF
YLGKHSGRKLQWQPTLGHAVLRTEFKEGKKELQVSLFQTLVLLMFNESDECSVEDIRTAT
GIEDGELKRTLQSLACGKARVLNKIPRGKDVEDADRFHFNSDFTHKLFRIKINQIQMKET
VEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKFPVKPADLKKRIE
SLIDRDYMERDKENPNQYHYVA
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgatggcggaagacattcagaaatcaaactttaatggactcaccaaatcagccaaatca
ggatcgtctaagaaactcgtcataaagaactttaaagacagaccgaaactaacagactcc
tacactgaagatacatggatgaagctcagagatgctgttagtgccattcagaacagcacc
tcaatcaaatataacctggaggagctttaccaggccgtggagaatctatgttcgtataaa
gtatcacctgtgttatacaagcagctgcgtcaagtgtgtgaagatcacgttcaagctcag
atccatcagttcagagaagagtcactggacagcctgtcattcctgaagaggatgaaccgc
tgctggcaggaccactgcagtcaaacgatcatgatccgcagcattttcctcttcctggac
cgaacatacatcctccagaattcactgctgccatccatctgggacacggggctggagttg
ttccgaacgcacattgtgagcgacggtgccgttcaaagacggacagtggagggaatcctg
gagcagattgagcgtgagcgtaacggagagacggtggaccgcagtctgctgaggagctta
ctgggcatgctctcagacctgcaggtgtataaagactcattcgagcagaggtttttatca
gagacgaaccgtctgtacgcagctgagggtcagaggctcatgcaggagagagatgttcct
gagtaccttcatcatgtggcgcggcgtctagaggaagagaatgaccgtgtcatcagttat
ttagatcagagcacacagaagccactcattgccacagtggagaagcagcttttgggcgaa
cacatgaatgccattctacagaaaggtctgtggatgctacttgatgagaaccgtgtttgt
gagctgacgctgctctatgagctcttaagtaaagtcaaaggagggctgatgacactgctg
caggcctggagagactacattaagagttttggaggagagatcgtgagttctccagagaag
gataaagagttggttcaggagcttctggacttcaaggacaagatggaccacgtgacccag
cgctgcttccagaggaacgaaactttcatcaatgccatgaaggaagccttcgagagcttt
atcaacaagagacccaacaaacctgctgagctcattgctaagtatgtggattctaaactg
cgcgctggaaataaggaggccacagaggaggagctggagaggattctggacaagatcatg
atcatcttccgattcatccatggaaaagacgtttttgaggctttttataagaaggatctg
gccaagcgtctgctggtgggcaagagcgcctcggttgatgctgagaagtcaatgctgtct
aaactcaaacatgagtgtggagcagcgttcaccagtaaactagagggcatgttcaaagac
atggaactctccaaagacatcatgatccagttcaaacagtacatgcagaaccagagtgat
cccagcaacatcgagctgaccgtcaacatcctgacaatgggctactggccctcatacaca
ccgatgaatgtccatctgcctgcagagatggtgaaacttcaggaagtgtttaagctattc
tatctggggaagcacagcgggcgtaaactacagtggcagcccacactgggccatgcagtc
ctgagaactgagtttaaagagggtaagaaggagctgcaggtgtctttgtttcagactctc
gtcctgctaatgtttaatgagtctgacgagtgttcagtggaggatatccgtacggccaca
ggcatcgaggatggtgagctcaagcgcacacttcagtctctggcctgtgggaaagcacga
gtgctcaataaaattccacgtgggaaagacgtggaggatgccgaccgcttccacttcaac
agcgacttcacacacaaactcttccgcattaaaatcaaccagatccagatgaaggagacg
gtggaggagcaggtgagcacaaccgagcgcgtgtttcaggatcgtcagtatcagatcgat
gcagcggtggtgaggatcatgaagatgaggaagactctgagccacaacctgctggtttct
gaactttacaaccagctcaagttccccgtcaagccggctgatctgaagaagcgcatcgag
tcactgatcgaccgtgattatatggagcgcgacaaagaaaacccaaaccagtaccactat
gtggcatag

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