KEGG   Carassius gibelio (silver crucian carp): 127952797
Entry
127952797         CDS       T08819                                 
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
cgib03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127952797
   03015 mRNA surveillance pathway
    127952797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127952797
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127952797
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 127952797
NCBI-ProteinID: XP_052407522
LinkDB
Position
B3:27575090..27591470
AA seq 760 aa
MADRRRRRRRASQDSEEEDESASGSESGGSLSGVRKTRGEEPVPVESPAERVSTKRDDES
ECESEDGVGEAVLSDYDSADLEENGSHTEGGEEEEGEHFSDEEASRPAAEPKPSADAPTE
ELGEEEERDGGVKEVKSDEKGNLAGERQSGDGQESTEDPENKSGSKGEKLDDDEDRKNPA
YIPRKGLFFEHDVRGQATEEERPKGRHRRLWKDEGRWEHDKFREEEQAPKSRDELIALYG
YDIRNGTGASDGRSYRPRKPRYAGSPSREPRRHRDGEKSVRTTWQAPPPGHRNTPQMVPL
QSGTPPAPPAASKPSGRPATQPPQRSFQSSRFSSAPHRTEGQRHSKPSLDGPPPRGVQPQ
PVEGERGPRLRGRGSHAVHAERSPAVVVEDVRSEEDEEEGEIPTATTTYTAHHYRTERER
VPAPRKQESGPAMEGGSAAGTVRESSPPQERPVEKKSYSLARRATRTRPSDLSKQASLDE
SSPAVQQAPAAAKSESWQEQSDAGTQAGLTGLDQDLARLSLAGQNWAQSPPSYLQAEMRG
IRSSMHMTGGPPQYGNMEDMQGVGGGRAKRYSSQRQRAVPEPAPMHIGVMEGHYYEPMSF
QGPIYTHGESPAALPPQGMLVQPEMHLPHPTHPGHPGLHPHQSGGPMPNPALYAAPPVSI
SPGQPPPQQLLPPPFYPPPGVMTFGNTNYPYPAGATLPPMYPNPQAQAQVQVYGGVTYYD
TVQQQALPKRSPPRRSSHPVTVRPPPPEDQSRKAAEEIHS
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcgacggagacggcgcgcctctcaggacagcgaggaggaggacgag
tccgcttcgggctccgagagcggggggtcgctgtccggcgtccggaagactcgcggagaa
gaacccgtgccggtggagtcgcccgcggagcgcgtgagcaccaagagagacgacgagtcg
gagtgtgaaagtgaagatggtgttggtgaagcggtcttatcggactatgacagcgctgat
ctggaggagaacgggtcgcacacggagggaggagaggaggaggagggagagcatttcagt
gatgaagaggcctcacgtcctgccgcagagccgaagcccagtgcagacgccccgacagaa
gagctcggtgaagaggaggagagagatggaggggtcaaggaagttaaatctgatgagaag
ggcaatctagctggggagcgacagagtggggacggacaggaaagcacagaggaccctgaa
aataaatcgggcagcaaaggcgagaagcttgatgatgatgaggacaggaagaatcctgcc
tacatcccccgaaaaggccttttctttgagcatgacgtgagaggccaggctacagaggag
gagaggccaaaaggcaggcacaggaggctgtggaaggacgagggccgatgggaacacgac
aagttccgcgaagaggagcaggccccaaaatcgcgcgacgagcttattgctttatatggt
tatgacatccgcaatggcacaggggcaagtgacgggcgatcgtaccgccctcgaaaaccc
agatatgctggttcacccagtcgggagccgaggcgtcaccgtgacggtgaaaagtcagtt
cgtacaacatggcaggcgcctccacctggccaccgcaacacccctcagatggttccccta
cagtcaggcacacctcctgctcctcctgcagcatccaaaccctccggccgacccgcgact
cagcctccacagcgcagcttccaaagcagtcgcttctcgtcggccccccacaggacagaa
gggcagagacactcgaagcccagtctagacggcccgccaccccgaggagtgcagccacag
cctgtagagggcgagaggggcccgaggctcaggggccgaggctcacatgctgttcacgcc
gagcgtagcccagccgtggtggtggaggacgtccgcagtgaggaagatgaggaggagggc
gagattccaacagctacaactacatacaccgctcaccactacaggacggagagagagagg
gtcccggctccacggaaacaagagtctggcccagcgatggaagggggcagtgcagccggt
acggtgcgagaatcgtctcctcctcaagagaggccggtggaaaagaagtcgtactctctt
gcgcggagggcgacgcgaacgcgaccgtctgatctcagtaagcaggcgtcattagatgag
tcttcgcccgcggtccagcaagccccggcagcagcaaagagcgagtcgtggcaagagcag
agcgatgctggaacacaagctggactgacaggcctcgaccaggacctggcccgactcagc
ctggcggggcaaaactgggcccaaagcccaccctcctacctgcaggccgagatgagaggc
attcgtagctccatgcacatgacaggaggccctccgcagtatggaaacatggaggatatg
cagggtgttggcggtggccgggctaagcgctattcatcacagcgccagagggcagttccc
gagcctgcacccatgcacattggagtcatggagggccattattatgaacccatgtctttc
cagggaccaatctacacgcacggggaaagcccagcagccctgccccctcaaggcatgctg
gttcagcctgagatgcacctgccacaccccactcaccccggacacccaggcttgcacccg
caccagtcaggaggtcccatgcccaatccagctctttacgccgccccgcctgtttctata
tcacctgggcaaccgcctccacagcagctgctgcccccacccttctacccccctccaggt
gtgatgacctttgggaacaccaactacccgtaccctgccggagctacgctacctccaatg
taccccaacccccaggcacaggcacaggtacaggtctacggtggtgtgacgtactacgac
acggtacagcagcaagctctgcccaaacgctccccgccccgacgctcctctcatcccgtt
acagtcagacctccccctcctgaggaccagagcagaaaggccgctgaggagattcactcc
tag

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