KEGG   Carassius gibelio (silver crucian carp): 127952805
Entry
127952805         CDS       T08819                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04137  Mitophagy - animal
cgib04144  Endocytosis
cgib04145  Phagosome
cgib04148  Efferocytosis
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127952805
   04145 Phagosome
    127952805
   04137 Mitophagy - animal
    127952805
   04148 Efferocytosis
    127952805
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127952805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127952805
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127952805
   04031 GTP-binding proteins [BR:cgib04031]
    127952805
Membrane trafficking [BR:cgib04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    127952805
 Endosome - Lysosome transport
    127952805
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127952805
  Exosomal proteins of other body fluids (saliva and urine)
   127952805
  Exosomal proteins of colorectal cancer cells
   127952805
  Exosomal proteins of bladder cancer cells
   127952805
GTP-binding proteins [BR:cgib04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    127952805
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase MCR_beta AAA_16 BrnT_toxin
Other DBs
NCBI-GeneID: 127952805
NCBI-ProteinID: XP_052407538
LinkDB
Position
B3:complement(23943838..23956958)
AA seq 221 aa
MAGRGGPARTNGAAPVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKEL
QRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKSEPQGGAGSAGRARGGVDLQETAPQGRSGQCCGGGN
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcggggcgaggtggaccagcgcggaccaatggtgccgcccccgtcgggaacaaaata
tgccagttcaaactggtcttgctgggagagtctgccgtgggcaagtccagcctggtgctg
cgtttcgtcaaaggccagttccacgagtatcaggagagcaccattggagctgctttcctc
acacagacagtctgcctggatgatacaacagtaaagtttgagatctgggacacagctgga
caggagcgctatcacagcttggcccctatgtactacagaggagcccaggcggccattgtc
gtctatgacattactaacacagacacattcactagagcaaagaactgggtgaaggagctg
cagcgtcaggcgagtccaaatatcgttattgctctggccggcaacaaggcagacctggcc
aacaagagagccgttgactttcaggaggcgcaggcatacgcagacgacaacagcctactc
ttcatggagacatctgcaaagacagccatgaacgtgaacgagatcttcatggctatcgcc
aagaagcttccgaagagcgaaccgcagggtggagcaggaagtgccgggcgggccagagga
ggcgtcgacttacaggagacagcacctcagggcagaagcggccagtgctgtggaggcggc
aactaa

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