Carassius gibelio (silver crucian carp): 127952894
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Entry
127952894 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127952894
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127952894
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
U-box type E3
127952894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
SR-25
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
127952894
NCBI-ProteinID:
XP_052407734
LinkDB
All DBs
Position
B3:complement(17154960..17172290)
Genome browser
AA seq
1776 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDN
GALIPKNSSVIIRRIPIGGLKSTSKTFVIDRSEQSGSSKAIDDSSSISLALLSKTANLAE
TNASEEDKIKAMMSQSNHEYDPIHYAKKLVGPPPPNYTCFRCGKTGHYIRNCPTNGQDRS
FEAPQRIKKSTGIPRSFMVEVDDPNRKGVMLTNSGIYAIPTIDAEAYAIGKKEKPPFLPQ
NQSSSSEEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRSCLLESDEHVCPTCKQ
SDVSPDALIANKFLRQAVNNFRNETGYTKRIRKVAAAHQASAQGAQTQAPAQRPPMRLAT
SRQQDPLMANVPSSAADSTPPQSTPAAPLSPVRTHQPSSTPPSSSSSTVNSSSAPAASNY
SPVVNSPQHSTKQDDPPSSKEPEVPASTVVPSSDTAASTTSIPKGYHVPVIGKPNMPQNH
MHRSGQSRASGPRPSGSRPAWDQSSSRGRAPSERPPSERPPRTQPPPLQNLPPVVPPVYV
PPALFPPPPHPMPQPPGGVPQQFPMQYPPGQQPPPPYNIPPPLFPPVPPNVTGPWVPPGA
QPPIANPISTVPAAPFLSKEEFYRQQRRLKEDSQCRFVTREKSSKLEEFTNDFAKELLEY
RKIQKERRRSYSRSKSPYRDSSYSGSSYSYSKSRSRSRSPRSYSRSVSRSRSRSRSRSHS
RSRSYSRSPYSRRGRGRSRSYRSRSRTPTYHRSRSRSPSYRGREMSGMGSGIYRSRSRSP
LYRNHSPSKKLPPPSQTEGERKYAGRYRELPPYDPKEYYGRNIDQSDPYERERYREWERE
YREWYDKYFKKYNNPPSSQMRGRAPGNRDPYTPERFAPPRPRENSPYSRGRREDYPPPPQ
SHGVPPRSRGSMTYQEKCAEKYGQLHVNTTGAGRGLNKEFLKPLKDREPSGSTAADPKSM
KHKKHRKKKREDSDLFSHSDSMDESRKDDRKEDSMLMNSSRDATPVRDEPMDSSTVPYKT
TPVKEKKEKSKSKTDKVKRKSENSGQKKETSGKMTKPAREKESDASQEKVAPTEPAIKRV
KDEPSHKSEPSKPQSSESKLMLPRKLMQSRPIKHHQEVRPIKDELKSKKELMKDPLKPDK
IPVKDGKVPQKEPEKPVKTEVKMPARTVDTKQDKKKRKDDKPPVKDLDVPPFKIAKIEVD
VAKSSPKSKPRLESERPIEKEKVAIPSLMDIKPEPVRKIKINREIGKRISSIDRPLSAED
SGHATGKGRLDKSRGKLRRKVHAPDGSGSILVDYTSTSSTGGSPIKKHEDKLDLKKTVVK
TLEEYTNDSSTPAEDEIVMIQVPRSKWEKEDYESEDDESKVATRTGSINTSRSAPIGENT
EVKSAGKESPDADKTLPVSKEADVKPAMDSTFGDKEKDTVKEKDGERDREKEKDRSSTAD
RETADKRKPSVPNQERERAQEKGSDHGSERSSSSQSSRDRQADKPEPTSRKPAGKESTTG
IPTRKTEHRDDARDHLGNRSKDERNPIRRRVSPSPPPRVKDLNTDSGRKTFDETPESQSP
SRNKRVSLQNAPEDHKGDWPCTKEIQGSRHSDVRPAKDREHRTPHRALTPEPRTDAEKGG
AHGDHIKIPSTRSTRLSSDLARETDEAAFVPDYSESDSETSDIDSKTEQRGRERDSSGSQ
SPSPSGSHGHSSSPSSPGSQDSKKKKKDKKEKKEKKKHKKHKKHKKHKKHTSNESESELK
GQKHKHKKKKSKKSKDKDDKEKDESERDEQKAKVCV
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtccattacaagttttcttctaaactgaactacgacacggtgaccttcgat
ggccttcacatcacgctcagtgatctgaaacgacagatcatgggccgagaaaagctgaag
gccgcggattgcgacctgcagatcactaacgcgcagactaaagaagaatacactgataat
ggagccctcatccctaaaaactcgtctgtcatcattagacggatccctattggagggctg
aagtcgacaagcaaaacatttgtcatcgatcgatctgaacaaagtggatcttcaaaagca
attgatgattcttcgtccatttcactggccctgctttcaaagacagctaatcttgctgaa
acaaatgcatccgaggaagacaaaataaaagcaatgatgtctcagtccaaccatgaatat
gacccaatccattatgcaaagaagcttgttggtccacctcccccaaactacacatgcttt
cgttgtggaaaaactggacattatatccgaaactgcccaaccaatgggcaggatcgaagt
tttgaagctccccaacggataaagaaaagtacaggaattcctcggagtttcatggtggag
gttgatgatccaaacagaaagggagtcatgttgaccaacagtggaatatatgccattcct
actattgatgctgaggcctatgccattggaaagaaagagaagccaccattcttgccccaa
aatcagtcttcatcctcagaggaagaagatccagtacctgacgagctgctctgtttgatc
tgcaaggatcttatgacagatgcggtggttatcccctgctgtggaaatagctactgtgat
gagtgtattcgatcgtgtttgctggagtctgatgaacatgtttgcccaacctgcaaacaa
tctgatgtatctcctgatgcattgatcgcaaacaaattcttgcgccaagcagtgaataat
tttaggaatgaaactggatataccaagaggattcgaaaagttgcagctgctcatcaagca
tctgcccaaggagcccaaacgcaagctcctgcccagcggccacctatgagactggcaacc
tcacgccagcaggaccctctgatggccaatgttccaagctcagcagctgatagcacccct
ccccaaagcacacctgctgcccctttatctcctgttcgcactcatcagccctccagcacc
ccaccgtcttctagcagctccactgtaaacagcagcagtgcacctgcagcatcgaactat
agtcctgtggtgaactctcctcagcactctactaagcaggatgaccctccttcatctaag
gaaccagaggtaccagcatctactgttgtgccttcatcagacactgctgcctcaacaact
tccattccgaagggataccatgtcccagtaattgggaagccgaatatgcctcagaaccac
atgcatagatcaggacagtcaagggctagtggaccaaggccgtctggaagccgtcctgca
tgggatcagtcctcaagtagagggagagctcctagtgaacgaccacctagtgaacgacca
ccaagaacacagcctcccccattacaaaaccttcctcctgtagtccctccagtgtatgtg
cctcctgctctttttcctcctcctccacatcctatgcctcagccacctggtggtgttcca
cagcagtttcctatgcagtatcctccaggacaacagcctccccctccctacaacattcca
ccacctttatttccacctgtcccaccaaatgtgactggtccatgggtacctcctggtgca
cagccacctatagcgaaccccatctctactgttccagcagcaccttttctatccaaggag
gagttttaccgtcagcagcgtagactgaaggaagattcccaatgtcgattcgttaccaga
gagaagtcttccaaacttgaggaatttacgaatgactttgccaaagaacttttggagtac
agaaagatccagaaggagagaaggcgatcctattctagatcaaaatctccttacagggat
tcctcctacagtggctcatcatattcgtattccaaatcccgctctcggtccagatcacca
cgctcctactctcggtcagtttcccgatctcggtcaagatcccgctcacgctctcattcc
cgatcacgctcctactctcgctcaccatactcccgcaggggccgaggtcgaagccgtagc
tatcgatctaggtcacgcactccaacatatcatcgctcccgcagtagatcaccatcatac
aggggtcgggaaatgagtggaatgggaagtggaatctatcgttcccgctctagatcccca
ctatataggaaccacagtcccagcaagaaactcccacccccttctcagactgagggtgag
cgcaaatatgcaggtaggtacagagagctccctccttatgatcctaaggaatattatggc
cgcaacatagaccaaagtgacccctatgagagagagcgatatcgagagtgggagagagag
tacagggagtggtatgataaatacttcaagaaatacaacaatccaccaagtagtcaaatg
cgaggccgtgctccaggcaacagagacccctatacacctgagcgttttgctcctccccga
ccaagggaaaactccccctacagcagggggcgtcgggaggattatccaccaccacctcag
agccacggtgtcccaccaagaagcagaggttccatgacataccaagagaagtgtgctgag
aagtatggccagcttcatgtcaacaccactggagcaggaagaggacttaacaaagagttt
ctaaaacctcttaaggaccgagaacccagtggcagcactgctgcagaccccaagtctatg
aagcataaaaaacatcgcaaaaagaagagagaagatagtgacctcttcagtcactctgac
tctatggatgaatccaggaaagatgatcgtaaagaagattccatgctgatgaattcaagt
cgtgatgccacacctgtcagggatgagcccatggatagctctacagtgccctacaagact
actcctgtaaaagagaagaaagagaagtcaaaaagtaaaactgacaaagttaaacgaaag
tctgaaaacagtgggcagaagaaggaaacgtcaggaaagatgacaaaacctgctagagag
aaagaatctgatgcatcacaagaaaaagtggctcccactgaaccagccattaagagagtc
aaagatgaaccatcccacaaatctgaaccaagcaaaccacaatcttcagagtccaaactc
atgctcccacgcaagttgatgcagtctaggcccatcaaacaccatcaggaggtaaggccc
atcaaagacgagctcaaaagcaagaaagaattgatgaaagaccctctaaagccagataaa
attcctgttaaagatgggaaggtcccccaaaaagagccagagaagcctgtaaaaactgag
gtgaagatgcctgctaggacagttgatactaaacaggataagaagaaacggaaagatgac
aagccacctgtgaaagacttagatgttcctccatttaaaatagcaaaaatagaagttgat
gtggctaaaagctctccaaaatctaaacccagactggagagtgaaaggccaattgaaaag
gagaaagtagctattccgtctctgatggacattaagccagagcctgtaagaaagattaaa
atcaacagggaaattggcaagagaatatctagcattgatcggccactttcagctgaggac
tctggtcatgccacaggaaagggcagactggacaagtctagaggaaaattgaggaggaag
gttcatgctcccgatgggtcagggtccatattggttgattacaccagcaccagttctaca
ggtggaagccccatcaaaaagcatgaagacaagcttgacctaaagaagactgtggtgaag
accctggaggaatataccaatgacagctccacccctgctgaggatgaaattgtcatgatc
caggtgccccgttccaagtgggaaaaggaagactatgaatctgaggacgatgaatctaag
gttgccaccagaacaggcagcatcaacacatccagatcggctcctataggggagaacact
gaagtgaaatcagctggcaaagagtctccagatgctgacaaaactctgccagtctccaaa
gaggcagacgtcaaacctgccatggactccacatttggtgataaggagaaagatactgtc
aaagagaaagatggagaacgagacagagagaaggaaaaagaccgcagcagcactgcagat
cgtgagacagctgataaaaggaaacctagtgtacccaatcaggaaagagagcgtgcacag
gaaaagggcagtgaccatggcagtgaacgaagctcttcttcccagtcctccagagatagg
caagctgacaagccagaacctacctctagaaaaccagcaggaaaggagtcaactacaggc
atccccactagaaaaacagaacatcgagatgatgcaagagaccacttagggaatagatca
aaagatgagagaaatccaatcaggaggagagtatcgccctccccgccaccaagggtaaag
gacttaaacacagactctggaagaaaaacttttgatgaaactccagagtcacaaagtcca
agtaggaataagagagtatcattgcagaatgccccagaggaccacaaaggagactggcca
tgcactaaggagatccagggttctaggcattctgacgtacgtcccgcaaaggaccgggaa
cacaggactcctcatagagctttgactccagagcctagaactgatgcagagaaaggtggc
gcacatggcgaccacataaaaatcccatctacacgctccacgagactgtcctcagattta
gcacgggaaacagacgaggctgcgtttgtccctgactacagcgaaagcgacagcgagacc
tcagacattgacagcaaaacagagcagagagggcgagagagggacagcagtggcagccag
agtccgagcccatctggcagccacggacacagcagcagccccagctctcccggcagtcag
gacagcaaaaagaagaaaaaggacaaaaaggagaagaaggaaaagaagaaacacaagaag
cacaaaaaacacaaaaagcataagaaacatacgagcaatgagtctgaatcagagctcaaa
ggacagaaacacaaacataagaaaaagaagtctaaaaagagcaaggacaaagatgacaaa
gaaaaagatgagagtgagagagatgaacaaaaggcaaaagtgtgtgtttaa
DBGET
integrated database retrieval system
