Carassius gibelio (silver crucian carp): 127953081
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Entry
127953081 CDS
T08819
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127953081
04121 Ubiquitin system [BR:
cgib04121
]
127953081
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127953081
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127953081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
zf-C2H2_12
DUF659
BIR
Motif
Other DBs
NCBI-GeneID:
127953081
NCBI-ProteinID:
XP_052407935
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All DBs
Position
B3:complement(50331373..50334773)
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AA seq
541 aa
AA seq
DB search
MEAPQKRCRKSVVWEHFHLETPNKVRCMYCDRQLAYFNNTSSMMRHLRSTHPAILQCAED
GNFPPVPRPATDTAGPSKQGRQRELDEALVDMVVKDLQPFTIVEDEGFMAFVNKLDPSYV
LPSRKALKTMVTERYNISKEKTMEDLKKADFVSLTADMWSSINMDGYLGVTCHYITPEAK
LATVVLGVRRFYQTHTAQHLMEAKALLMAEWGITTKVQCMVTDNASNMILSAQLLNLRHV
PCFAHNLNLIVKKALDQTPLINEIRQKARKIVGLFRSSCKAKDKLVEMQGLMGRPALKLM
QEVDTRWNSTYDMLQRLYEQREPVGAALSNLNSDTAPLTSFEYNIIQESLSLLQPFKLAT
TELSEEQRVSASKLISLYRMLQHKLSQKKGQSAQESTAQLGTHLQEGLHSRCGGYESFRA
LALATLLDPRFKNVGFGNPAKAQEAEKQITLECASLMRSNTATPEPQSTSGPSSSSSSTT
TSTTETQDSLWELFDSRIHETQATHSVTVEMGVGKVSKPRNKYGTLLQLFQCFMKPRSAH
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccacagaagagatgccgtaaatctgtggtgtgggagcatttccatttggaa
accccaaataaagtgagatgtatgtattgtgataggcagctagcctacttcaacaataca
tcatccatgatgcgccatttgaggagcactcatcctgccattttgcagtgtgcagaggat
ggtaactttccccctgtacctaggcctgctactgacactgctgggccatctaaacaaggc
agacagagggaattggatgaggctcttgtagacatggtggtaaaggatttgcagcccttc
actatcgtggaggatgagggtttcatggcttttgtgaacaaacttgatccaagctatgtc
ctcccatcccggaaggcacttaaaacgatggtaaccgaaaggtacaacatttctaaggag
aagacaatggaggacctaaaaaaggcagattttgttagccttacagctgacatgtggtcc
tccattaatatggacggataccttggtgttacttgccactacataacaccagaggcaaag
ctggcaactgttgtactgggtgtaaggaggttttaccaaacacacacagcccagcatctc
atggaggctaaagctttgctaatggccgagtggggaataaccaccaaagttcagtgtatg
gtgactgataatgcatccaacatgatcttaagtgcccagctactgaaccttcggcatgtc
ccatgttttgcccacaatttaaatttaattgtaaaaaaggccctagatcaaaccccactc
atcaatgaaatacgacagaaagccagaaagatagtggggttatttagatccagctgcaaa
gcaaaggacaagcttgtggagatgcagggcttgatgggcagaccagctctgaaactgatg
caggaggtggacacaagatggaacagcacttacgacatgttgcagcgcttgtatgagcaa
cgagagccagtgggtgcagcgctatcaaatttaaacagtgatactgctccgctgacaagt
tttgagtataacattatacaagaatcattgtcactactgcagcctttcaaactcgcaacg
acagagttgtcagaggaacagagagtgtctgcttcaaagctcatatcactttacaggatg
ttgcagcacaagctatcacagaaaaaaggccaatcagcacaggaatcaactgcacaatta
ggcacacacctgcaagaaggtctgcactcaagatgtggtgggtacgagtcattcagagcc
ttggctctggctacactgctggacccaaggttcaaaaatgtgggttttggaaatcctgcc
aaagcccaggaggctgaaaagcagatcacactggagtgtgcttcgctgatgcgttcaaac
acagcaactcctgagccacagtcaacatcaggcccatcatcatcatcatcatcaacaaca
acatcaacaacagaaacccaggacagtttatgggaactttttgatagtcgtatccatgaa
acccaggcgacacacagtgtcaccgtggagatgggtgtcggtaaagtttcgaagcctcga
aacaaatacggcactttgcttcaactgtttcagtgtttcatgaagcctcgctctgcccac
cactaa
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