Carassius gibelio (silver crucian carp): 127953125
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Entry
127953125 CDS
T08819
Name
(RefSeq) ATP-dependent DNA helicase Q5 isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127953125
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127953125
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
127953125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ5
RecQ_Zn_bind
TFIIS_M
ResIII
EloA-BP1
EAD2
SRI
Motif
Other DBs
NCBI-GeneID:
127953125
NCBI-ProteinID:
XP_052408031
LinkDB
All DBs
Position
B3:30567857..30591168
Genome browser
AA seq
964 aa
AA seq
DB search
MSAIHRALKTHFGFDQFRSQQQEDAVNAVIKGDRDVFILMPTGAGKSLCYQLPALVTSGI
TLVISPLIALIQDQVEHLKALNVPARSINSKLPPAERRQILADLESESPRLKLLYITPEM
VASPSFQPCLSSLCARGLLAYLAVDEAHCVSQWGHDFRPDYLKLGDLRSRLQGVPCVALT
ATAPKRVQQDIEGSLKLRSPLVFATPVFRKNLKYDVIFRDLLPDPYVHLLAFAKEALGGN
TAEKGCGIVYCRTRESCEEVAHKLTKLGIPAKPYHAGLKVGDRTDSQTDWMTDKVPVIVA
TISFGMGVDKANVRFVVHWNLAKSLASYYQESGRAGRDGLPSSCRIYYSPKDRDQLNFLI
RKEIGRKQEKRGSEKEQDKAPLMDFEAMVAFCEQEGCRHATISQFFGNPKPNCAGVCDFC
RDPKLVRAQLARAAALSTRTGPGQSAEPRGPFGFDPELYAGGRKGYGFERHDEEWGSEED
DSEKRKKEFGSLFRKQMSLRRTSDVAKETFVPPDDDCMLRDASSQRIPRLTVKSREHCLS
LLQECLTNHRGAAELSHSSDTLDEAVEIEHEIFRASKSANLYKASVLKRVSEMKKSAAAS
VAEEKRSESNEETATCSSSSQPLDGFTSQVYSLKRKRVGAGFRGSSSLFQTAGDLLKNSQ
KETLAADKRPGDPICEDEEQVETGETLKMKSSKTTPADTSPIKAKTSTTSPLSSPSKKLT
KKQQKLAEAAKDMRRISQYFGKKQVDTAQMKTGSVISEPEEEVSQNHSSSPNHTDLITKI
STSTDVETSTGVLQQQSPSAEEMANRDGTSTADPAVQGEHHQSDAQRKSPKQSHENRSPS
PPAKRSRVMKDTKRVTFDPVVQETQFDTVVNGDAAGTSRTPVTLKEAADIVVRCLDPFYK
KGKFATKDLFKSFARFLSHLLTEGKTAYRGQVKMEAKSLIKSFFSRIQRCESETDWRHLK
VEDR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccattcaccgggctttaaagacacacttcggattcgaccagtttcgatctcag
cagcaggaagatgccgttaacgcggtgataaagggtgacagggatgtgtttatcctgatg
cccactggagcggggaagtctctgtgctatcagctgcctgctcttgtgaccagtggcatc
actctggtcatctctcctctgatcgcactcatccaggatcaagtggagcacctgaaagct
ctgaatgttcctgcacggtccatcaactccaaactccccccggctgagcggcgtcagatc
ctggcggacctggagagcgagagtccccggctcaagctgctctatatcactccagagatg
gtggcgtcgccgtccttccagccctgcttgagctcgctgtgtgcgcggggtctgctggcg
tatctggctgtggacgaggctcactgcgtctctcagtggggtcatgacttcaggccggac
tatctgaagctcggggacctgcgctcccgtctgcagggggtcccgtgtgtagcgctgacg
gctacagcacccaagagagtgcagcaggacatcgagggctcgctgaagctgcgctcgcca
cttgtctttgccactcctgttttccgaaaaaacttgaaatatgacgtgatattccgggat
ctgttgcctgatccttatgtgcacttgcttgcgtttgccaaagaggctctgggtggaaat
acagcggaaaagggctgtgggattgtttactgtcgcaccagagagagttgtgaggaagtt
gcacataagctgactaaactaggaatcccagccaagccctaccatgcagggctgaaggtg
ggcgatcgcactgacagtcagactgattggatgaccgataaagtgcctgttattgtggcc
accatcagttttggtatgggagtggacaaggccaatgtcaggtttgtggttcactggaac
ctggcgaagtctttggccagttactatcaggagtcgggacgagctggacgagacggactg
ccctcgtcttgcaggatctactactcacccaaagaccgagatcagctcaacttcctcatc
cgcaaagaaatcggccgcaaacaggagaagcgaggatcagagaaagagcaggataaagca
cctttaatggacttcgaggcaatggtggctttttgtgaacaagaagggtgcagacatgcc
accatctcacagttttttggcaatccgaagcccaactgcgccggcgtgtgtgacttctgc
cgcgaccccaaactggtgcgcgctcagctggcgagagcagccgccctcagcaccaggacc
ggcccgggacagagcgcggagcccagggggcccttcggcttcgaccctgaactctacgcc
ggaggcaggaagggttacggctttgagagacatgatgaggaatggggcagtgaggaagat
gactcagagaagaggaagaaagaattcggaagtctcttcaggaaacagatgagtctcaga
aggacatcagatgtggctaaagagacgtttgttccaccagatgatgattgcatgttgagg
gatgccagcagtcagagaatccccagactcacggttaagagcagagagcactgcctgtct
ctgctgcaggagtgtctgaccaaccacaggggggcagcagagctctcacacagctctgac
acacttgacgaggctgtagaaatagagcacgagatcttcagagccagtaaatcagcaaac
ctgtacaaggcttcggttctcaagagagtgtcagagatgaagaaaagcgcagctgcaagt
gttgctgaagagaaacggtctgaatcgaatgaagagacggcgacctgctcttcatcatct
caacctctagacggcttcacttctcaagtctactcactgaagaggaagcgtgtaggagca
ggatttcgtggctcgtccagcctgtttcagacagctggagatctgctgaagaactctcag
aaggagacgcttgccgcagacaagagacctggagaccccatctgtgaggacgaggagcag
gtggaaaccggagaaacactgaagatgaaaagcagtaaaacaactcctgctgacacgtct
cccatcaaagccaaaaccagcacgacttcgcccctgagcagccccagtaaaaaactcact
aagaaacagcagaaactagcagaggcggccaaagacatgcgccgcatatcacagtatttc
ggaaaaaagcaagtggacaccgctcagatgaaaacaggaagtgttatatccgagcccgag
gaagaagtatctcagaatcactcgtcttcaccaaatcacaccgacttaataacaaagatc
agcacgtctacagatgtagaaacctctactggtgttcttcagcaacagagtccatctgca
gaagagatggccaaccgagacgggacgtccacagcagacccagcggttcagggagagcat
caccaatctgacgcccagcgaaaatcaccaaaacaatcacatgagaacagatcaccgtct
cctccagcgaaacgcagccgcgtgatgaaggacactaagagagtgacctttgacccggtg
gtgcaggagacacagtttgacaccgtggtgaacggagacgccgctgggacctcgcgaacg
cctgtgacgctcaaagaagctgccgatatcgtggtgcgctgcctggatccgttctacaaa
aagggcaaatttgcaactaaggatctgttcaaatcctttgcccgtttcctctcccatctt
ctcacggagggaaaaactgcatatcgaggccaagtgaagatggaagcaaagagcctgatc
aagagcttcttcagcaggattcagcgctgtgagagcgagacagactggagacacttgaaa
gtggaggacagatag
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