Carassius gibelio (silver crucian carp): 127953129
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Entry
127953129 CDS
T08819
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04148
Efferocytosis
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127953129
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127953129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgib04090
]
127953129
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
127953129
04091 Lectins [BR:
cgib04091
]
127953129
CD molecules [BR:
cgib04090
]
Proteins
127953129
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
127953129
Lectins [BR:
cgib04091
]
I-type lectins (Siglecs)
127953129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
Ig_5
V-set
DUF6054
CD34_antigen
Ly49
Motif
Other DBs
NCBI-GeneID:
127953129
NCBI-ProteinID:
XP_052408044
LinkDB
All DBs
Position
B3:complement(30709716..30719790)
Genome browser
AA seq
739 aa
AA seq
DB search
MSVCLLWLGLSALWQAADIHAAVTIDQVMLTVLPASNVESGTEVIFRCEASVSQSLSQSL
TYSFRLLQDDQVVYAENISASVMEHSLSSVRVSNSGHYKCSVHIYDKHKMSNDLSLSVTG
LQIPTLKVKSDIVSEGEDIIATCSASEEIGSLVFYFYENDLEVKRVKSNSNSVKSILTTQ
KVTEIYLRCAYIVIMHSNAGFSNKSNMVKVIVRDLDAITPQISISPKGNVVEGDRVQITC
MVKYPSDLELYLTKNITILHKSHTTFTKSLVVRAEDSGDYVCKAEKGSVQKKAVYMLHVA
ELFSKPILRMSPEEVFEGDRFNLTCSSNVTSSVKIGKADIKYVLLKDGGRIKEDAEYEDT
ASPATNGKYYCMAMAKEVNKTSSPHDVKAKVPVSAPVICAVDEVIVGKPFRVSCEAESGT
LPINYTLLKTHVPVAHRTVVTAADRAIFNVTSISFPEDINTFTCRAYNRGSSFSRTSEPL
ASPVIVPVSRPVLETKEDTISEGSDLTLICRVQQGTYPITFTWYHNRVILRPSIKEVRSS
EGRHVIKAIKREQRGNYYCEASNYASETKESDPAKIDVSLALWKQAVIGLLCILLLVAIV
IVLTFFFKRVSHPRRRKQETELSVKPSRPKSGDPMRISLTLDIEDNTVLNGTPGVMGRNV
WSGNASGSDSDDPPDEDSKLVQPQEVGLCREVPVTKSIEHHYSVQHTEVQVSTPGVLEQA
DGQAAVEYAQLNNSEQGPA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgtgtcttctctggctcggcctgagcgcactgtggcaagcggccgacatacat
gcagcggtgaccattgatcaggtgatgctgacagtgcttcctgctagtaatgtggagagt
ggcactgaggtgatctttcgttgtgaggccagtgtcagtcagagcctctcccagtcgctg
acatactccttcagactcctgcaggacgatcaggtggtgtacgccgaaaatatcagcgcc
tcagtgatggagcacagcttatcttctgtcagggtgtccaactctggtcactacaagtgc
agtgtccacatctacgacaagcacaaaatgagcaacgacctgtcattaagcgtcacaggt
cttcagatccctacgctgaaggtgaagtctgacattgtgtctgagggggaagacattatt
gccacatgcagtgcatcagaggaaataggcagtctggtcttctacttctacgagaatgat
ctggaagtcaagagagtcaaaagtaacagcaactctgtaaagtccattctgaccacgcag
aaggtcacagaaatctacctgcgttgtgcctatatagttataatgcactctaatgctggt
ttctccaacaaaagcaacatggtgaaagtcattgtacgagaccttgatgcgatcacccca
cagataagcatctcacccaaagggaatgttgttgagggtgacagggtgcagatcacatgc
atggtgaaatatccctcagatcttgagttgtacctcactaaaaacatcaccattcttcac
aaatctcatacaaccttcacaaagagccttgtagtaagagctgaggactcaggggactat
gtgtgtaaagcagagaaaggcagcgtgcaaaagaaggcagtctatatgctacatgtcgca
gaactgttctctaagccgattttgagaatgagcccagaggaggttttcgaaggcgatcgc
ttcaatctgacctgcagcagtaatgtaacctcctctgtgaagatcggaaaagcagacata
aagtatgttttgctgaaagatggtggacgcattaaagaagatgcagaatacgaagacact
gcgagccccgccaccaatgggaaatactactgcatggcaatggctaaagaagttaacaag
accagctcaccacatgatgtaaaagctaaagtgcctgtttctgccccggtcatttgtgct
gttgatgaggtgattgttggtaagccgttcagagtttcatgtgaggctgaaagtggaacg
cttccaataaactacaccttattgaagacccacgttccagtggctcacaggacagtggtt
acagcagccgacagggcgatctttaacgtaacctccatcagttttccagaagacatcaac
accttcacatgtcgggcttataaccgtgggtcatcgttcagtaggaccagtgaacccctt
gcatcacccgtcatagtaccagtttccaggcctgtcctggagacaaaggaggatacaatc
tcagaggggtcagaccttaccctcatctgccgtgtacaacagggcacttaccccatcacc
ttcacctggtatcataacagagttatactccgtccttccatcaaagaggtcagatcctcc
gaaggaagacacgtcatcaaagccatcaaacgagagcagagaggcaactactactgtgag
gcatctaattacgcctcggaaaccaaagaaagtgatccagccaaaattgatgtcagttta
gcgctgtggaagcaggctgttattggattgctctgtatcttgcttttggtggctatcgtc
atagtcctgacattcttttttaagagagtgtcccacccacgcagacgaaagcaagaaact
gagttatcagtaaaaccttcaaggcccaaatcaggtgacccgatgagaataagccttact
ctcgacattgaagataacactgttctcaatggaactcccggtgtgatgggcaggaacgtc
tggagtggaaatgcatccggctcagattctgacgatcctcccgatgaagactctaagctg
gttcagccacaggaagtgggtctctgcagagaagttcctgtgacgaaaagcatagagcac
cattacagtgtccaacacacagaggtccaggtgtccacaccaggagttttggaacaggct
gatggccaggcagctgtggaatatgcacaactcaacaacagtgagcaaggacctgcatag
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