Carassius gibelio (silver crucian carp): 127953160
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Entry
127953160 CDS
T08819
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03015
mRNA surveillance pathway
cgib03040
Spliceosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127953160
09122 Translation
03013 Nucleocytoplasmic transport
127953160
03015 mRNA surveillance pathway
127953160
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127953160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127953160
03041 Spliceosome [BR:
cgib03041
]
127953160
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127953160
TREX complex
127953160
Spliceosome [BR:
cgib03041
]
Complex C
Other components
EJC/TREX
127953160
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127953160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
127953160
NCBI-ProteinID:
XP_052408102
LinkDB
All DBs
Position
B3:complement(30681119..30685291)
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AA seq
268 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQRGGGGRGGGRGGRGAGAGGRLGNTGGGFGGRGGGSGPMRSRQ
GLSRGRSRPTPYSRPKQLPDKWQHDLFDNGYSVSAGGGGGGAAGGVETGGKLLVSNLDFG
VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPM
NIQLVTSQIDAQRRTPMQGLNRGGGGMNRNRIGGFGAPRGRGGRGGGGGGARGRGRGGRG
GGGGSKQQLSAEELDAQLDAYNARMDTS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagatggatatgtccttagacgacatcatcaagcagaaccgtcagcgcgga
ggcggcgggcgcggcggcgggagaggaggccgcggtgctggcgccggagggcgcctcgga
aacaccggcggaggcttcggaggccgcggcggcggatcgggccccatgaggagccgccag
ggcctgagccgcggaagaagcagacccacgccgtacagcaggcccaagcagctcccagac
aagtggcagcatgacctgttcgacaacggctacagtgtgagcgctggcggtggaggcggg
ggtgcagccggcggtgtggaaaccggaggaaagctcctcgtgtccaatctcgacttcggc
gtctccgacgcagatattcaggaactgttcgctgaatttggcactttgaagaaagcagca
gtacattacgatcggtcgggacgcagcctcggcactgcagacgttcactttgagaggaaa
gcagacgctctgaaagccatgaagcagtacaacggtgtcccccttgatggtcgtccaatg
aacattcagcttgttacctcacagatcgacgcacagaggcggactccaatgcagggtcta
aatcgtggaggtggtggcatgaaccgaaacagaattgggggctttggtgcaccgagaggt
cgcgggggacgtggtggtggtggaggaggagccagaggtcgggggcgagggggtcgagga
ggcggcggtggcagcaaacagcagctctctgccgaagaactggacgcccagctagatgcc
tataacgccaggatggataccagctaa
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integrated database retrieval system