Carassius gibelio (silver crucian carp): 127953237
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Entry
127953237 CDS
T08819
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127953237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127953237
Transporters [BR:
cgib02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127953237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
ACT_13
RsgA_GTPase
AAA_15
AAA_23
AAA_22
AAA_29
Cas6_I-A
AAA_27
Motif
Other DBs
NCBI-GeneID:
127953237
NCBI-ProteinID:
XP_052408200
LinkDB
All DBs
Position
B3:complement(7526916..7569107)
Genome browser
AA seq
1706 aa
AA seq
DB search
MAVWQQFRLLLWKNYIQQKRQILVTLVEIALPLLFSAILIVLRQKVSFINHPNATHYDSF
GLSGLPFPLCFQELQLAYVPANASVVRQITEDVQQSLRGCISTVRGFETEEQFEEFVKTD
PESGKILAAIVFEHQFTHDDEPLPLQVSYNLRFTYSPRNAPTREKSELNPNNDLDWHTLR
LFPLIQLPGPREQLEKHGGTPGYYREGFLQVQHAVDRAIMKAYNSTAAEALLKRAQVLLA
RFPYPVFIYDIFILAIQSQLPLLLVLSFTYTSLNIIRAVVQEKERKLKEYMRMMGLSNWL
HWSAWFLMFLLFLSISIFFVTVLICVKVSPNGAVLTYSDPTLVFVFLLVFAVSTINFSFM
ISTFFSRANVAAAAGGFIYFLSYLPYVFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIG
MFEGKGTGIQWCNLFEPVTVDDDFSLAHVLGLLLLDSVLYALVAWYMEAVFPGEYGVPRP
WYFFILPSYWCSSPRVTLQKEKEEEEEAEKVSKGEFIEEEPAGLVSGVKIKHLAKVFKVG
NKTKEAVRDLTLNMFEGQITVLLGHNGAGKSTTLSMLTGLFPPSSGRAYISGYDICQDMA
LIRRSLGLCPQHDVLFDNLTVREHLLFFTQLKGYPRKKIPDEVDRILRILNLEDKRHARS
KTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHF
MDEADLLGDRIAIMASGELQCCGSPLFLKNKYGAGYHMVIVKDAFCNVSEISRVVHMYVP
DATLESNAGAELSYILPKESTSRFELLFAELEMNRDELGIASYGASVTTMEEVFLRVGKL
VDSSLDIQAIQLPALQYQHERRSHDWTMDDSSSIMTDTTDFTDSGTMISEDGSNIKFNTG
ARLYMQQFYAMFLKRALYSWRNWKVMVAQFLVPLVFTVLALVVARTLPGSQITPLLRLAL
KHYGPTHVPVAVDVDAGPLATALAEIYAAQLPSQNAIAATNITDLSEYVLYNAEMEGGAF
NEHCVVGATFRSRSRKNTEVIGYFNNQGYHTPATALMLVDNALYKLLAGPDASIQTGNYP
MPRNMSETAQSQLSEGQTGFAIAINLMYGMASLASTFALLLVSERSVKSKHVQQVSGVYL
SNFWFSALLWDLINFLLPCLLMLVVFRVFSVEAFVAENHLVDVLLLLLLYGWAVIPFMYL
LSFLFSTAATAYTRLTIFNILSGTATFLAVTIMTIPELKLEDMSHLLDKIFLVFPNYCLG
MSFSQFYQNYEIITFCTSSKLAEFICKSYNITYQVNYFSMDEPGVGRFLVAMSLQGVVFI
ALVFLVELRCVHTLLNLCRRRKKVLLLAEEALQPEDRDVAEERKRVMDCQPVVESMVDSP
LILQELCKVYSGGQSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESITSGDA
FIDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVTACVENVLR
SLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAITRT
RESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVRVETE
LEEMDLQLFKDFIESTFPGSLLKDEHHGMVHYHLTDKALTWAQVFGVLETAKEKYSIEDY
CVSQISLEQVFLSFAQFQHCAEACRK
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtggcagcagttcagactgcttctgtggaagaactatatccagcaaaagcgt
cagatcctggtcactctggtggagatcgctctcccgctgctcttctcagccatcctgatt
gtcctgcgacagaaggtgtcgttcatcaaccaccccaatgccacacactacgacagcttc
ggtctgagcggcctgccgttccccctgtgcttccaggagctgcagctggcctacgtgcct
gcaaacgccagcgtggtgcggcagatcacggaggacgtgcagcagagcctgcgcggctgc
atcagcaccgtgcgtggctttgaaactgaggagcagtttgaggagtttgtgaaaacggac
ccagagtcaggcaagattttggcagccattgtgtttgagcaccagttcacacacgacgac
gagccgcttcctcttcaggtcagctataatctgcgcttcacgtacagccccaggaacgcg
ccgacgcgcgagaagtctgagctcaaccccaacaatgatctggactggcacacgctccgt
ctgttcccgctgatccagctgcccgggcccagagaacaacttgagaagcacgggggcacg
ccaggatattaccgcgagggcttcctgcaggtgcagcacgcggtggaccgggccatcatg
aaggcctacaacagcacggcggcggaggccctcctcaagagagcccaagtgctgctggcc
cgcttcccttacccagtgttcatctacgacatcttcatcctggccatccagagccagctg
ccactgctgctggtgctcagcttcacctacacctctctgaatatcatccgcgctgtggtg
caggagaaggagaggaagctgaaggagtacatgcgcatgatgggtctcagtaactggttg
cactggagcgcctggttcctcatgtttctcctcttcctctccatctccatcttctttgtg
accgtacttatatgcgtcaaggtgagtcctaacggagcggtgttgacctacagcgacccc
acgctggtgttcgtcttcctgctggtgtttgccgtgtccaccattaacttcagcttcatg
atcagcaccttcttctccagagcgaatgtggccgcagcagcgggcggcttcatctacttc
ctgagctacctgccgtacgtcttcctgtggcctcgctatgacctgctgtcgcacgcccag
aaagtctccgcctgcctcatctccaacgtggccatggccatgggagcccagctgatcggc
atgttcgagggcaaagggacgggcatccagtggtgtaacctgtttgagccggtgacggtg
gacgatgacttctctctggctcacgtgctgggtctgctgctgctggactcggtgctgtac
gctctggtggcctggtacatggaagccgtgttcccgggagaatatggagtccctcgtcca
tggtacttcttcattctgccctcatactggtgcagcagcccccgtgtgaccctacagaag
gagaaggaggaagaggaggaggccgagaaggtgtcgaagggcgaattcattgaagaggag
ccagctggactggtctcaggggtcaagatcaaacatttggcaaaggttttcaaagtggga
aataagaccaaggaggcggtgagggatttaacgctcaacatgttcgaaggccagatcact
gtcctgctgggtcacaacggagcgggcaagagcaccacgctttcaatgctgacaggcctt
ttccctcccagcagtggccgtgcgtacattagcggttacgacatatgtcaggacatggct
ctgatccgccgaagcctgggtctgtgtccgcagcacgacgtgctcttcgacaacctgacc
gtccgagaacacctgctcttcttcacacagctgaagggttatcctcgcaaaaagatccct
gacgaggtggaccgcatccttcggatcctgaatttggaggacaagcgtcatgcacgatcc
aaaaccctctctggcgggatgaagaggaagctttccatcggcattgctttaatcggagac
tcaaaggtggtgatgctggacgagcccacctcaggaatggacccctcagcccgccgggcc
acctgggacctgctgcagggcgagaagcgcggccgcaccatcctgctcaccacacacttc
atggacgaggccgacctgctgggagatcgcatcgccatcatggccagcggagagctccag
tgctgcggctcgccgctcttcctcaagaacaaatacggtgctggttaccacatggttata
gtgaaggatgcgttttgtaacgtgtccgagatcagccgtgtagtgcacatgtatgtgcct
gatgccactctcgagagcaacgcaggcgctgaactctcctacatactgcccaaagagagc
accagccggtttgagctgctgtttgctgagctggagatgaatcgagatgagttgggcatc
gccagctatggggcgtccgtcaccacgatggaggaggtttttctcagggttgggaagctg
gtggactccagtctggatattcaggccatccagctcccggctcttcagtatcagcatgag
cggcggtcacatgactggaccatggacgactccagcagcatcatgacggacacgacggat
ttcactgacagcggcaccatgatctcagaggacggctccaacatcaaattcaacactggg
gccaggctctatatgcagcagttctacgctatgttcctgaagagggcgctctacagctgg
cgtaactggaaggtgatggtggctcagtttctggtgccgctggttttcacagtcttggct
cttgtagtggcccgcaccctccctggaagccaaatcacgcccctgctccgtctggcgctg
aaacactatggccctactcatgtacccgtggctgtagatgtcgatgctgggccgctggct
acagctctggctgagatctatgctgcacagctgccttcccagaatgccattgctgccact
aatataacagatttgtcagagtacgtgctatataatgctgagatggagggcggagctttc
aatgagcactgcgtggtgggcgcgactttcaggagccgatccaggaagaacactgaggtc
atcggctacttcaacaaccagggctatcacacccccgctacagcgctcatgctggttgac
aacgctctctacaaactactagctggacccgatgcctcaatccagacgggaaattacccc
atgccacgcaacatgtccgagacggcccagagccagctttctgaaggccagacaggtttc
gccatcgctataaacctcatgtacggcatggcatcattagccagcaccttcgccctgctc
ctcgtctcggagcgatcggtgaagtccaaacatgtgcagcaggtcagcggggtctacctc
tccaacttctggttctccgccctgctgtgggacctcatcaacttcctgctgccctgcctg
ctcatgctggtggtcttccgagtgttttcagtggaagcatttgtagctgagaaccacctg
gtggacgttctgcttttgctgcttctgtatggctgggcggtgattcccttcatgtacctg
ctcagcttcctgttttccacggctgccacggcctacacgcgcctcaccatcttcaacatc
ctcagcggcacggccaccttcctcgcggtcaccatcatgaccatacctgagctaaagcta
gaagacatgtctcaccttctggataagatcttcctggtcttcccgaattactgcttgggc
atgtccttcagccagttctaccagaactacgagatcatcaccttctgcacctccagcaag
ctggccgagttcatttgcaagtcctacaatatcacctaccaggtaaactacttttccatg
gatgagcccggagtgggccgcttcctggtggccatgtccctacaaggtgttgtcttcatc
gccctggttttcctcgtcgagctccggtgcgtccacacactgctcaacctctgcaggaga
cgcaagaaggttttgctgttggcagaagaagctctccagcctgaggacagagatgtcgcg
gaggagaggaagagagtgatggattgccagccggtggttgagtcaatggtggacagcccg
cttatcctacaggagctctgcaaggtatattcaggcgggcagtcgctgctagcggtggac
cgtttgtctttggccgttgggaagggcgagtgctttggtttgctggggtttaatggagct
gggaagactacgacattcaaaatgctgacaggagatgaaagcataacgtcaggagatgcc
tttattgacggctacagcatcctccgggatgtgaaaaaggtgcagcagagaattggctac
tgtccccagtttgacgcggtgctagatcacatgacggggcgggagaccctgagcatgtat
gccagactgaggggcatcccagagaaatacgtcacagcctgtgtagaaaacgtcctgcgt
tccctgctgctcgaacctcacgctgacaaactcgtccgcagctacagtggcggtaataag
aggaagttgagtgcaggcatggctctgatcggtgggccgcccgtgatcttcctggacgag
ccgtccactggcatggaccctgtggccagacggctgctgtgggacgcaattacacgcacc
agagagtctggtaaagccatcatcataacctcccacagtatggaggagtgtgaggcgctg
tgcacccggctggctgtcatggtgaacggtcagttcaaatgtctgggcagcccacagcac
ctgaagagcaagtttgggagcgggtacacgctgctggcgaaggtccgcgtggagacggag
ttagaggagatggaccttcagctcttcaaagacttcattgaaagcaccttcccaggaagt
ttactgaaggatgaacaccatggaatggtccactatcacctgacagacaaagctctcacc
tgggcacaggtttttggtgttctagaaacagccaaagagaagtacagcatcgaggactac
tgcgtcagtcagatctctctggagcaggtgttcctcagcttcgcccagttccagcactgc
gccgaggcctgcaggaaatga
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integrated database retrieval system
