Carassius gibelio (silver crucian carp): 127953309
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Entry
127953309 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
cgib04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127953309
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127953309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127953309
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127953309
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127953309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127953309
NCBI-ProteinID:
XP_052408406
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Position
B3:11708277..11718992
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AA seq
550 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTDDEGAKPRALYG
VEFTFDSDARVAITIYCQAFEEFSNGMAIYNPKTPALVSETVYYKRGVSQQFTLPSFKID
LSEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCFGHAHVLLAAFERHVDGSFSVKPLKQKQ
IVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNS
CADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMDHDEHSSSDSVP
PGFEPISLLEALNGLGAVSPGLPSAPLYDEINFSGSLSGESRQLSSPDHSGDSGGQKSKV
SKSPDSTLRSPSSPIQEEDEEKLSEMSDAQAHMLLSSSPAPTEGTAGEDAPDSLSPEDED
RLNLEEEAMNDCSSEHSSFTKTESDMPGDLSLPGLSGSMESLNTQSTWCSSQPLLGPSSL
LHMDYDELDV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaattctcagtcgaagaatcgctggtgttgaggacatcgacatccaggccaat
tctgcatacagatatcctccgaaatcaggaaactattttgccagccattttttcatggga
ggagagaagtttgacacccctcatccagagggttacctgtttggagaaaacatggatctc
aacttccttggtaaccgcccagtgcagtttccctatgttactccagcgccccatgagccg
gtcaagacattgagaagtcttgtcaatatcagaaaagactcattacgattggtcaggtat
aaagatgatgctgatagtcctactgatgatgaaggtgcaaaaccaagggccttgtatgga
gtggagttcacctttgactctgatgcacgagtggccatcactatctactgtcaggctttt
gaggagttctctaatgggatggcaatatacaaccccaaaactcctgcactggtctcggaa
accgtatattacaaaagaggggttagccagcagtttacccttccatccttcaagatcgat
ttatctgaatggaaggaagaagatctcaactttgatttagacagaggtgtttttcccatg
gtgatccaggctgtggttgatgaaggagatgattgttttggacatgcccatgtactgctg
gcagcatttgaaagacatgttgatggcagtttctcggtcaaacctttgaaacagaaacaa
atagtggaccgtgtcagctacttgttacaggagatttatggaattgagaacaagaacaat
caagagacaaagccgtctgatgatgagaacagtgacaacagcaacgagtgtgtggtgtgt
ctgtcagatctgcgggacaccctgattttgccctgtaggcacttgtgcctgtgtaactcc
tgcgctgatactctgcgctaccaggccaacaactgcccgatctgccgactgccgtttcga
gctcttcttcagattcgagctgtaagaaagaagcctggagcgctttctcctgtttccttc
agccctgtgctggctcagagcatggatcatgatgagcactcgagctcagactctgttccg
cctgggtttgagcccatctcgctcctggaggctttgaacggtcttggtgccgtgtcccct
ggccttccgtctgctcctctgtatgatgagatcaacttctctgggagcctgagtggagag
agcaggcagctcagctcacctgaccactctggagacagcggcggacagaagagcaaagtc
agcaagtcaccggacagcactctacgctctccatcgtcacccattcaggaggaggatgaa
gaaaaactgtcagagatgtcggatgcacaagctcacatgctgctgtctagcagtcctgcc
cccactgagggtacggcaggagaggacgcccccgattcactgtctcctgaagatgaggat
cgattaaatttggaggaagaggcgatgaatgactgcagtagtgagcacagcagctttacc
aaaactgaaagtgacatgcctggagacctgtccctccccgggttatctggctcaatggag
agtctgaacactcagagtacctggtgctccagccagccgctcctgggtccctcaagcctt
ttgcacatggactatgatgaactggatgtttaa
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