Carassius gibelio (silver crucian carp): 127953424
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Entry
127953424 CDS
T08819
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127953424
04121 Ubiquitin system [BR:
cgib04121
]
127953424
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127953424
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127953424
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
BCAS2
APAF-1-like_WHD
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
127953424
NCBI-ProteinID:
XP_052408630
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Position
B3:34524907..34526656
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AA seq
284 aa
AA seq
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MLNLPRHKLIHDVTTLLDKDLKLSVKNVTMLNDSEQKLAEELIQVLTPLKTVTTLMSSET
TPTISMIHPLKEMILKSMSPGDQDSATVKEAKAAIINDLAMRYTDPNLHDYLQIATALDP
RFKSLPYLDEDSRDKLYRNIINEILEHEQQGLVENPVPSTDEHNPSSPPPKKTAMSEVFG
ELFKTEEQQGKPFPQIIEEEVTTYKLADSIHVDADPFIWWKTNERKFPHVAKAAQKHLCV
PGTSVASERIFSTAGDIVSAKRSRLAAENVDRLIFLQKNLKIQE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacttgcccagacacaagttaattcatgatgtcacaaccttactggacaaagat
ctgaagctgtctgtcaagaacgtaaccatgttgaatgacagtgaacagaaacttgcagaa
gaactgattcaggtcctcacaccactgaaaacagtgacaactctcatgagcagtgaaaca
acccccactatatcaatgatccatcctctgaaagagatgattctcaaatccatgtcacca
ggagaccaggacagtgcgacagtcaaagaagccaaagcagccattataaatgacctggca
atgaggtatactgaccccaatcttcatgattacctccaaattgccacagcccttgacccc
aggtttaaatccctgccttaccttgatgaagactctcgcgataagctctacaggaatatc
atcaatgaaattctggagcatgaacagcagggtctagtggagaatcctgtgccctccaca
gatgaacacaatccatcctctccccctcccaagaagacagcaatgtcagaggtatttggg
gagcttttcaaaactgaggaacagcagggtaagccatttccccagatcattgaggaggaa
gtcaccacatacaagttagcagacagtattcatgtggatgctgatccattcatatggtgg
aaaacaaatgaacgcaagttcccccatgtagcaaaagctgcacaaaaacacctctgtgtc
ccaggaacctctgttgcgagtgagagaattttctccactgccggggacattgtaagtgca
aaacgctctcgccttgctgcagagaatgttgacaggcttatctttttacagaagaacctc
aaaatccaagaatag
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