Carassius gibelio (silver crucian carp): 127953573
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Entry
127953573 CDS
T08819
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127953573
04020 Calcium signaling pathway
127953573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127953573
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127953573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127953573
NCBI-ProteinID:
XP_052408735
LinkDB
All DBs
Position
B3:complement(14968215..15024784)
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AA seq
2208 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDLKCQSEWCVVLQAFDDCIFAFFAVEMVIKMIALGIFGSKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFMPDNVTALYNLSHMSPYYMNEEGEE
NPFICSANKENGMLRCNQVPHLKEGVECTLDASPPGHAYSGLDGTGNSSCVNWNQYYSEC
KPGELNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGS
FFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEEMLRYISHL
YRKVKRRTSRIYSGWQSKRRKKVNPNSGLSGGGGGGGGGGGGGGVNGHSRHRGGGHWLRS
IHSLIQQHQRQHCHLSNGSPSPVTATGPGEALEMRSIATGSQLTVSSQPTGMHNLSSRTQ
SVHSIYQGDFQEAPQGQTSTAVSVPALGRLNGGMNYPTILPSLICSYTGSSSAGKGRRGS
DANMGCDATDPFEKLHQLMGEHSHSRVLLQVAGVVPSPLLLELLSCPYCARALESMDGEL
GDSDYSRSEGDVVYEFSHGAEFKPCRASHHKILEERNCLAQYWEDFRDRLRRIVDSKYFN
RGIMIAILINTLSMGIEYHEQPEELTNILEISNIVFTSMFVLEMLFKLLAFGIFGYIKNP
YNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVA
TFCMLLMLFIFTFSILGMHLFGCKFSLKTENGDTIPDRKNFDSLLWAIVTVFQILTQEDW
NVVLYNGMASTTPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANKSDVDEEKRSV
NFEEEEKMGELRATELKMYSLMMSANGHVDIRGTLPPPIIMRTAATPMPTPKSSLGPESV
FGLTESRRGSGISIDPSAFDQKSLTSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRK
DTSGERESLLSGDGRGSFEDEDLDGEKLANISGGSLQHPSSLDIPELPQTPSFSSMGDYH
DCNGRSLHLPTDLSANLSKEDSIAEEDMDDSFCFRLKRTFEAYKPKWCKDHEEWSLYLFS
PQNKFRVMCQRLISHKLFDHVVLVFIFLNCITIALERPSIQPSERKFLSISNYVFTVIFV
AEMTVKVVALGFCAGKHSYLQSTWNVLDGVLVSVSLIDILVSLAYTSGNRILGILRVLRL
LRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCE
GGDTKNITNKSDCLHANYKWIRRKYNFDNLVQALMSLFVLSCKDGWVNIMYDGLDAVGVD
MQPERNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQRL
LEKKRRKAQQRPYYADYSPARLYIHTLCTNHYLDLFITCIIGINVVTMSIEHFNQPYYLE
EGLKYCNYVFTIVFIIEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNAA
LPINPTIIRIMRVLRIARVLKLLKMATGMRSLLDTVMQALPQVGNLGLLFMLLFFIYAAL
GVELFGKLECNDNNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECLPNES
NCFSYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMEM
ARRLSNVSAGSSSGPEGRATYVGPHTDSPGQDDRIQRTQENLLSPRKMSVSRMHSLPNDS
YMFRPVRPASAPYPLEEVEASQGYLELGSITSVHSQPCESHSLLQVPGVPPHSQFNYLPK
IPPPMPSPTHSIGRTLHRQEAIKNDNVNVQGFDSKDNPDRQAGISTGSFKLRVPRIAGPS
IPQGSPLLPPRGHASSVCTFQLPHSKHNIPSPPPSLASSSRSTSPSGSMFDSADPTDEEV
RHINSTARLWVGIQAEARSHSLSPYTTSGTLLPVPVKNCSSAANLSIKDPKKCFSVDTEG
FLEKPYGTDDHRRHSIEICSSVDEGLFGQELSEKRHVPMRGQSLHIPRKKKMSPPCISIE
PPFETGAPASLASMKKLSESSMLLRRRTPSYDLALQRDSLDLLENQLSTQPLIKVERHPS
HCAEYLSLPHPTPMGGLAGILCESSQPPPFDTRFEESTDFSSVNRTAQ
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgattctgttgaactgtgtgactctgggcatgttccagccatgtgaggacctc
aagtgccagtcggagtggtgtgtcgtcctacaggcatttgatgactgcatcttcgccttc
tttgctgtggagatggtcatcaaaatgatagccttggggatttttggatcaaagtgttac
cttggtgacacatggaaccgcctggacttcttcattgtcatggcagggatgatggagtat
tcactggacggtcataacgccagcctgtcagccatccggactgtgcgagtgctcaggccc
ctgcgagccatcaacagagttcctagtatgaggatactggtgactctgcttcttgatact
ctgcctatgttaggcaacgtcctcctgctgtgcttttttgtcttctttatattcggcata
gttggggtgcagctgtgggctggtcttcttaggaatcggtgtttcatgccagataacgtg
acagccctttataatctgtcacacatgagcccgtactacatgaatgaagaaggtgaggag
aaccccttcatctgctccgccaataaggagaacggcatgttgcgctgtaatcaggtgccc
cacctcaaggagggtgtcgagtgcactttagatgcatctccaccgggacatgcctactct
ggcctggatgggacaggcaacagcagctgtgttaactggaaccagtattacagtgagtgt
aaacccggggagctcaaccctcacaaaggggcagtgaacttcgataatattggatatgcc
tggattgcgatattccaggttattactttggaaggatgggtggacatcatgtattacgtt
atggatgcccactccttttacaattttatatattttatattgcttattatagtgggttcc
ttcttcatgatcaacctgtgcctggttgtaatagcaacccagttctcagaaacaaagcag
cgtgagaaccagctgatgcaggagcagcgagcacgttacctctccaacgacagcaccctc
gccagctactctgagcctgggagctgctacgaggagatgctcaggtacatcagccacctg
taccgcaaggtgaagcgccgcacgtcccgcatctacagcggctggcagagcaagcgcaga
aagaaggtgaaccccaacagcgggctgagcgggggaggaggaggaggaggaggaggaggt
ggcggtgggggggtcaatggtcacagcaggcacaggggtggcggacactggcttcgctcc
atccacagcctcatccaacagcaccaacggcagcactgtcatctcagcaatggcagcccc
agtcctgtgaccgctacggggcccggcgaggctctggaaatgaggtccatcgcaacgggg
tcgcaactgaccgtgtcctcacagccaaccggcatgcacaatctttcttccaggactcag
tcagtgcacagcatttatcaaggggactttcaggaggccccgcaaggccaaacaagcacc
gctgtgagtgtgccagcgctcgggcgactaaacggcgggatgaattatccgaccatcttg
ccctccctcatttgcagctatacgggcagcagttctgcagggaaaggaaggagggggtcg
gatgcaaatatgggatgtgatgcgactgatccctttgagaagctgcaccagctcatggga
gaacatagccacagtcgtgtgctgctgcaggtggctggtgttgtgcccagtccattgctt
cttgagctcctgagctgcccgtactgtgcaagggccctggagtcaatggatggggagctc
ggtgattcagactactccagatcagaaggggacgtggtttacgagttctcccatggagca
gagttcaagccctgccgtgcatcccatcataaaatcctggaggagcgtaactgcctggct
cagtactgggaagacttccgggacagattgagacgcatagtggatagcaaatactttaat
cgaggaattatgattgcaatcctcatcaacaccttgagtatggggattgaataccatgag
cagcctgaggagctgacaaacattctggagattagcaacatcgtcttcactagcatgttt
gtcctcgaaatgctcttcaaactgctggccttcggcatctttggctacatcaagaacccc
tacaacatctttgatgggatcattgtagtcataagcgtgtgggagatcatagggcaggcg
gatgggggtctgtcagtgctgaggacgtttcgtctcctgcgtgtgctcaaactggtgcgc
ttcctccctgcactgcgcagacagctggtggtcctgatgaagaccatggacaacgtggct
acattctgcatgctgctcatgctcttcatcttcacattcagcattcttggaatgcatctc
tttggatgcaaattcagcctgaaaacggagaatggagacactattccagacaggaaaaac
tttgattccctgctgtgggccattgtcactgtgtttcagatcctgactcaggaagactgg
aacgtggtcctctataatggaatggcttccactacgccatgggcagctctttactttgtg
gctctgatgacttttgggaattatgtgctctttaacctactggtggccatcttagtggag
ggatttcaggcagagggagatgctaacaagtcagatgtggatgaggaaaagcgctcggtg
aactttgaagaggaagagaagatgggggaattacgagctacagagttgaagatgtactct
ctgatgatgtcagcgaatgggcatgtggatattcgaggcactctgccccctccaatcatc
atgcgcactgccgccacccccatgcccactcccaagagctcgctcggccccgagtcagtg
tttggtttgaccgagtccagacggggaagtggcatctcaatagatccaagtgcttttgat
caaaagtccctgactagcccaagaagatctccatgccacccccgtggctcaggcagtaac
tggggcagccgcaggtcaagctggaacagcttaggacgggcgccgagtttgaaaaggaag
gacacgtctggggagagagagtctctgctgtctggggacggcaggggcagctttgaggac
gaagacttggacggggagaagctggccaatatcagtgggggctcactgcagcatcccagc
tctctagatatccctgagctgccccaaacccccagcttcagctcgatgggagactaccac
gactgcaatggaagaagcctgcacctgcccactgacctctccgccaacctcagcaaggaa
gactccattgcagaggaggacatggatgatagcttctgtttccgtctcaagaggacgttt
gaggcatataaacctaagtggtgtaaagatcatgaagagtggtccctttacctgttctcc
cctcagaacaagtttcgggtgatgtgtcaaaggttaatttctcacaagttgtttgatcat
gtagtcttggtattcatctttttaaactgcattaccattgctctggaaagaccctctatt
cagccatccgagcggaagttcctcagtatctccaattatgttttcactgtgatttttgtt
gctgaaatgactgtgaaggtggtggcccttggcttctgcgccgggaagcacagttatctg
cagagcacctggaatgttctggacggggtgctggtctctgtctctctcattgacattctg
gtctctctggcctatactagtggaaaccgaatccttggcatcttgagggttcttcgtctg
ctgagaactctgcggccgctgagagtgattagtcgcgctcctggactgaagcttgtggtg
gaaacgctaataacgtcgctgaggcccattgggaacattgtgctgatctgctgtgctttc
tttattgtcttcggcattcttggagttcagctcttcaaaggaaagttttaccattgtgaa
ggtggcgacaccaaaaacatcaccaataagtctgattgccttcacgcaaactacaaatgg
attcggagaaagtacaactttgacaacttggtacaggctctcatgtcgctgttcgtgctt
tcctgtaaggacgggtgggtcaatataatgtatgatgggttggacgctgtaggggtggat
atgcagcctgagcgcaatcacaacccctggatgctcctctacttcatctctttcctgctg
atcgtcagcttctttgtgctgaacatgtttgtgggagtggtggtggagaacttccacaag
tgtcgtcaggaccaggaggaagaggaggcgcgcctgcgtgaggagaagaggcagagactg
ctggagaaaaagcgcaggaaggcccagcagagaccgtactatgcagattactctccagcc
cggctctacatccacacactgtgtaccaaccactacctggatctcttcatcacctgcatc
atcggcatcaatgtggtcactatgtctattgagcatttcaatcagccttactaccttgaa
gagggactgaaatactgtaactatgtctttaccatcgtcttcataattgaggctttactc
aagcttgtggcatttggttttcggagattcttcaaagacagatggaaccagctggatcta
gccatagtcctgctctctatcatgggcatcactctggaggagatcaagatgaacgcagca
ctgccaatcaaccccactatcatccgcattatgagggtgctgaggatagccagagtactg
aagcttttgaagatggctacaggcatgagatccctgctagacacagttatgcaagcttta
ccacaggtgggaaatctgggcttgctgtttatgctcctcttcttcatttatgcggcactt
ggcgtggagctttttgggaaactagaatgcaatgacaacaacccatgcgaaggattaagc
agacatgctacatttgagaactttggaatggcctttttaacgttattcagagtatcgacg
ggggacaactggaatggcataatgaaggacactctgcgagagtgccttccaaatgaaagt
aactgcttcagctatctgcccctggtttcccccatctacttcgtcacctttgtgctaatg
gctcagtttgtgctggttaacgtggtggtggccgtactgatgaaacacctagaggagagt
aataaggaggctaaagaagatgcagaaatggacgctgagattgagatggagatggaaatg
gctcggcgtctcagcaatgtctcagcagggagctcttcagggcctgaaggaagggcaact
tatgtaggaccacacacagattcacctggacaggatgataggatacaaagaacacaggag
aatttgctctctccgcggaaaatgtctgtgtcgaggatgcactctttgcccaatgacagc
tacatgtttcgccctgtgaggccagccagtgctccttatccactagaagaagtggaagcc
agtcaagggtaccttgaattaggctcaatcacctcagtccactcccagccatgcgaaagc
cattccctgctccaggtccccggtgttcctccccattcccagttcaactacctccccaag
attccccctcccatgccctctccaacccacagcataggcaggactttacacagacaggag
gcaattaaaaatgacaacgtcaacgtgcaaggattcgactccaaagacaaccccgacaga
caggcaggaatatctacaggcagcttcaagctgcgtgttcctcggatcgccggacccagc
atccctcaggggtcaccgttgctgcccccacgtggacatgcctccagtgtctgtaccttc
cagctgccccatagcaagcacaatatcccttctccacctcccagcctggccagcagcagc
agaagcaccagtcccagtggctccatgttcgattccgccgatccaacggacgaggaggtc
cgccacatcaacagtacagcacggctgtgggtagggattcaggcagaagcccggagtcac
tccctgtctccttacaccacctcagggacgctgcttcccgtccccgtgaagaactgcagc
agtgctgccaacttaagcatcaaagacccgaagaagtgcttcagcgtggacacagagggt
tttctggaaaaaccctatggtaccgatgaccatcgcaggcactcaattgagatttgctct
tcagtagatgaagggctgtttggtcaagaactcagtgagaagaggcacgttcccatgcgt
ggacagtcgttgcatattcctcgtaagaaaaagatgagccctccttgtatctccatcgag
cccccgtttgaaacaggggctcctgcttctctcgcatccatgaaaaagctgtcggagagc
agcatgctactacggaggaggacgccatcttacgacctggccctgcagcgggactctctg
gacttgctggagaaccagctgtctacccagccgctcatcaaagtagagcggcacccctct
cactgtgccgagtatctgtccctgccacaccccaccccaatgggcggactggcaggcatt
ctgtgtgaaagctcacagccgcccccctttgacacccggttcgaagaatcaacggacttc
agctctgtaaacaggacagcccaatga
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integrated database retrieval system
