KEGG   Carassius gibelio (silver crucian carp): 127953626
Entry
127953626         CDS       T08819                                 
Name
(RefSeq) integrin beta-3a
  KO
K06493  integrin beta 3
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03266  Virion - Herpesvirus
cgib04081  Hormone signaling
cgib04145  Phagosome
cgib04148  Efferocytosis
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04810  Regulation of actin cytoskeleton
cgib04820  Cytoskeleton in muscle cells
cgib05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    127953626
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    127953626
   04512 ECM-receptor interaction
    127953626
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127953626
   04148 Efferocytosis
    127953626
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127953626
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127953626
   04810 Regulation of actin cytoskeleton
    127953626
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127953626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127953626
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127953626
   04515 Cell adhesion molecules [BR:cgib04515]
    127953626
   04090 CD molecules [BR:cgib04090]
    127953626
Membrane trafficking [BR:cgib04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    127953626
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127953626
Cell adhesion molecules [BR:cgib04515]
 Integrins
  Integrin beta subunits
   127953626
CD molecules [BR:cgib04090]
 Proteins
  127953626
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_TEN EGF_Teneurin vWA_SIBA-E DUF4621
Other DBs
NCBI-GeneID: 127953626
NCBI-ProteinID: XP_052408819
LinkDB
Position
B3:24941653..24954025
AA seq 783 aa
MGLNLIEVWATVLLLVSTAAGSNICTSRGVSNCKECLSIHPTCAWCSQEIFGKGGSSLSR
CDFRDSLIQSGCGVKFIEFPVSSMRILENVPLSDKAGGSDDITQIQPQKIHLTLRPDDSK
KFTVTVKQAADYPVDLYYLMDMTNTMKDDLQKLYTLGNGLVTALRGVTSNLRMGFGAFVD
KPLSPYMYISPAEVIQNPCYKFPEPCPPQFGYRNVLSLTEQVERFTEEVKKQKVSRNRDA
PEGGFDAIMQAVVCKDKIGWRPDASHLLIFTSDDRSHLALDARLAGIVQPHDGECHINNY
NEYDKSTILDYPSLGMITDKLSENNINLIFAVTNNMVDLYRNYSELIPGSAVGTLSRDSG
NVVQLILDAYAKIRSKVELELLGVPDELSLFINATCLGGELIPGVKSCAGLKIGDTVSFN
IEAKLYGCPKEKNRTFIVKPIGFKDTLQVTVDFACECNCQQSSVPASPSCHHGNGTLECG
VCLCDPGRLGSRCECSEGEYKPTQQDSCSPGPAAPVCNGRGDCVCGQCACRSTNFGKVWG
PYCECDDFSCLRSKGQICSGNGECNCGTCQCVSGWSGDSCDCSTRTDGCMASGGMMCSGR
GHCVCGVCECTQPGAYGSTCEKCPTCPDACTIKKECVECKHYKRGDLYEKNCNHFCRDDI
VPVIELVFHEKNSVNCSYKDEDDCVQNFQYYEDASGKSFLYLVKEPECPKGPDVLVVALS
VAAAILLLGLATLLVWKLLITIHDHREFAKFEEEKAKAKWEAANNPLYKGATSTFQNVAY
RGS
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgggactgaatttgatagaagtttgggcgacagttttacttctagtttccacagctgcg
ggctctaacatttgcacttccagaggagtgagtaactgtaaagaatgtctgtcgatacat
ccgacctgcgcctggtgctctcaggagatctttggaaagggaggctcgagtttgtcccgt
tgcgattttagagacagtctcatccagtctggttgtggcgtgaagttcattgagtttcca
gttagcagcatgaggatactagagaacgtacccctgagtgacaaggcaggggggtcagat
gacatcactcagatccaaccacaaaaaatccacctgaccctcaggccagacgattcaaag
aaattcacggtcactgtgaagcaagcagctgattacccagtggacctgtactacctgatg
gacatgaccaataccatgaaggacgacctgcagaagctttatacactgggcaatggtctg
gtcacagctttacggggcgtcaccagtaatctgcgcatgggatttggagcttttgtagac
aaaccgctctcaccttacatgtacatttccccggcagaagtcatccagaatccttgttat
aagtttcctgaaccctgcccaccgcaattcggctatcgtaacgtactgtctctgacggag
caggtagagcgcttcacagaggaagtgaagaaacagaaggtgtccagaaacagagacgcc
cctgaaggtggatttgatgctatcatgcaagcagtagtatgcaaggacaaaattggatgg
aggcctgatgcatctcatttgctgatcttcacaagtgatgacagaagtcatttggctttg
gatgccaggctggctggaatcgtccagccccatgatggagagtgccacatcaacaactac
aatgaatatgacaagtccactatactggactatccttcacttggtatgatcacggacaaa
ttatctgagaataacatcaacctcatctttgctgtaaccaataatatggtggatctttat
cgtaactacagcgagctgattcccggctctgcggtcggaacgctttccagagactctgga
aatgttgtgcaactcattctggatgcatatgcgaagatcagatctaaggttgagctagag
ctgctgggtgtgccagatgagttatctctgttcataaacgcaacatgtctgggtggagag
ctcattcctggcgtcaaatcctgcgctggactcaaaattggagatacggtttcatttaac
attgaggcaaagctttacggctgccccaaagagaagaaccggaccttcattgtgaagcca
ataggttttaaagacacccttcaggtgactgtggactttgcttgtgaatgtaactgtcag
cagtcctccgtgcccgccagcccgtcctgtcaccacggtaacgggaccctggagtgcggc
gtgtgcctgtgtgacccgggacgactgggctctcgatgtgagtgctccgagggcgaatat
aaacccacccaacaagacagctgtagccctggcccagcagcgccggtttgtaatgggcgc
ggagactgtgtgtgcggccagtgtgcctgtcgctcgactaatttcgggaaggtttgggga
ccgtactgtgaatgtgatgacttcagctgcctccgttccaaaggacaaatatgctcaggt
aatggtgagtgcaactgtggcacctgccagtgtgtctctggatggtccggggatagctgt
gactgctcgacccgcacagacggctgcatggcgagcggaggaatgatgtgtagtggccgt
ggccactgtgtgtgtggcgtctgtgagtgcacacagccaggagcctatgggtccacctgt
gagaagtgtcccacctgcccagacgcctgcaccatcaaaaaggagtgtgtggagtgtaaa
cattataagagaggggatctgtatgagaagaactgcaatcacttctgcagagatgacatt
gtgccggtgattgagctcgtctttcatgagaagaactcggtgaactgtagctacaaggat
gaggacgactgcgtccagaacttccagtattatgaagacgccagtggaaaatccttcctc
tatcttgttaaagaaccagagtgtcctaagggtcctgatgtgttggtggttgctctttcg
gtcgccgctgcgatcctgctgctgggactggctacgctcttggtgtggaagcttctgatc
accattcatgaccatcgtgaatttgccaaatttgaggaggagaaagccaaggctaagtgg
gaagcggctaataatccgctctacaaaggagccaccagcaccttccaaaacgtagcatat
cgtggcagttaa

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