Carassius gibelio (silver crucian carp): 127953626
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Entry
127953626 CDS
T08819
Name
(RefSeq) integrin beta-3a
KO
K06493
integrin beta 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03266
Virion - Herpesvirus
cgib04081
Hormone signaling
cgib04145
Phagosome
cgib04148
Efferocytosis
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04810
Regulation of actin cytoskeleton
cgib04820
Cytoskeleton in muscle cells
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
127953626
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
127953626
04512 ECM-receptor interaction
127953626
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127953626
04148 Efferocytosis
127953626
09144 Cellular community - eukaryotes
04510 Focal adhesion
127953626
09142 Cell motility
04820 Cytoskeleton in muscle cells
127953626
04810 Regulation of actin cytoskeleton
127953626
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127953626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127953626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127953626
04515 Cell adhesion molecules [BR:
cgib04515
]
127953626
04090 CD molecules [BR:
cgib04090
]
127953626
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127953626
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127953626
Cell adhesion molecules [BR:
cgib04515
]
Integrins
Integrin beta subunits
127953626
CD molecules [BR:
cgib04090
]
Proteins
127953626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
DUF4621
Motif
Other DBs
NCBI-GeneID:
127953626
NCBI-ProteinID:
XP_052408819
LinkDB
All DBs
Position
B3:24941653..24954025
Genome browser
AA seq
783 aa
AA seq
DB search
MGLNLIEVWATVLLLVSTAAGSNICTSRGVSNCKECLSIHPTCAWCSQEIFGKGGSSLSR
CDFRDSLIQSGCGVKFIEFPVSSMRILENVPLSDKAGGSDDITQIQPQKIHLTLRPDDSK
KFTVTVKQAADYPVDLYYLMDMTNTMKDDLQKLYTLGNGLVTALRGVTSNLRMGFGAFVD
KPLSPYMYISPAEVIQNPCYKFPEPCPPQFGYRNVLSLTEQVERFTEEVKKQKVSRNRDA
PEGGFDAIMQAVVCKDKIGWRPDASHLLIFTSDDRSHLALDARLAGIVQPHDGECHINNY
NEYDKSTILDYPSLGMITDKLSENNINLIFAVTNNMVDLYRNYSELIPGSAVGTLSRDSG
NVVQLILDAYAKIRSKVELELLGVPDELSLFINATCLGGELIPGVKSCAGLKIGDTVSFN
IEAKLYGCPKEKNRTFIVKPIGFKDTLQVTVDFACECNCQQSSVPASPSCHHGNGTLECG
VCLCDPGRLGSRCECSEGEYKPTQQDSCSPGPAAPVCNGRGDCVCGQCACRSTNFGKVWG
PYCECDDFSCLRSKGQICSGNGECNCGTCQCVSGWSGDSCDCSTRTDGCMASGGMMCSGR
GHCVCGVCECTQPGAYGSTCEKCPTCPDACTIKKECVECKHYKRGDLYEKNCNHFCRDDI
VPVIELVFHEKNSVNCSYKDEDDCVQNFQYYEDASGKSFLYLVKEPECPKGPDVLVVALS
VAAAILLLGLATLLVWKLLITIHDHREFAKFEEEKAKAKWEAANNPLYKGATSTFQNVAY
RGS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggactgaatttgatagaagtttgggcgacagttttacttctagtttccacagctgcg
ggctctaacatttgcacttccagaggagtgagtaactgtaaagaatgtctgtcgatacat
ccgacctgcgcctggtgctctcaggagatctttggaaagggaggctcgagtttgtcccgt
tgcgattttagagacagtctcatccagtctggttgtggcgtgaagttcattgagtttcca
gttagcagcatgaggatactagagaacgtacccctgagtgacaaggcaggggggtcagat
gacatcactcagatccaaccacaaaaaatccacctgaccctcaggccagacgattcaaag
aaattcacggtcactgtgaagcaagcagctgattacccagtggacctgtactacctgatg
gacatgaccaataccatgaaggacgacctgcagaagctttatacactgggcaatggtctg
gtcacagctttacggggcgtcaccagtaatctgcgcatgggatttggagcttttgtagac
aaaccgctctcaccttacatgtacatttccccggcagaagtcatccagaatccttgttat
aagtttcctgaaccctgcccaccgcaattcggctatcgtaacgtactgtctctgacggag
caggtagagcgcttcacagaggaagtgaagaaacagaaggtgtccagaaacagagacgcc
cctgaaggtggatttgatgctatcatgcaagcagtagtatgcaaggacaaaattggatgg
aggcctgatgcatctcatttgctgatcttcacaagtgatgacagaagtcatttggctttg
gatgccaggctggctggaatcgtccagccccatgatggagagtgccacatcaacaactac
aatgaatatgacaagtccactatactggactatccttcacttggtatgatcacggacaaa
ttatctgagaataacatcaacctcatctttgctgtaaccaataatatggtggatctttat
cgtaactacagcgagctgattcccggctctgcggtcggaacgctttccagagactctgga
aatgttgtgcaactcattctggatgcatatgcgaagatcagatctaaggttgagctagag
ctgctgggtgtgccagatgagttatctctgttcataaacgcaacatgtctgggtggagag
ctcattcctggcgtcaaatcctgcgctggactcaaaattggagatacggtttcatttaac
attgaggcaaagctttacggctgccccaaagagaagaaccggaccttcattgtgaagcca
ataggttttaaagacacccttcaggtgactgtggactttgcttgtgaatgtaactgtcag
cagtcctccgtgcccgccagcccgtcctgtcaccacggtaacgggaccctggagtgcggc
gtgtgcctgtgtgacccgggacgactgggctctcgatgtgagtgctccgagggcgaatat
aaacccacccaacaagacagctgtagccctggcccagcagcgccggtttgtaatgggcgc
ggagactgtgtgtgcggccagtgtgcctgtcgctcgactaatttcgggaaggtttgggga
ccgtactgtgaatgtgatgacttcagctgcctccgttccaaaggacaaatatgctcaggt
aatggtgagtgcaactgtggcacctgccagtgtgtctctggatggtccggggatagctgt
gactgctcgacccgcacagacggctgcatggcgagcggaggaatgatgtgtagtggccgt
ggccactgtgtgtgtggcgtctgtgagtgcacacagccaggagcctatgggtccacctgt
gagaagtgtcccacctgcccagacgcctgcaccatcaaaaaggagtgtgtggagtgtaaa
cattataagagaggggatctgtatgagaagaactgcaatcacttctgcagagatgacatt
gtgccggtgattgagctcgtctttcatgagaagaactcggtgaactgtagctacaaggat
gaggacgactgcgtccagaacttccagtattatgaagacgccagtggaaaatccttcctc
tatcttgttaaagaaccagagtgtcctaagggtcctgatgtgttggtggttgctctttcg
gtcgccgctgcgatcctgctgctgggactggctacgctcttggtgtggaagcttctgatc
accattcatgaccatcgtgaatttgccaaatttgaggaggagaaagccaaggctaagtgg
gaagcggctaataatccgctctacaaaggagccaccagcaccttccaaaacgtagcatat
cgtggcagttaa
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