Carassius gibelio (silver crucian carp): 127953929
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Entry
127953929 CDS
T08819
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03440
Homologous recombination
cgib03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127953929
03460 Fanconi anemia pathway
127953929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
127953929
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127953929
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127953929
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Topoisomerases
127953929
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127953929
FA (Fanconi anemia) pathway
127953929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
127953929
NCBI-ProteinID:
XP_052409259
LinkDB
All DBs
Position
B3:14834272..14843185
Genome browser
AA seq
1003 aa
AA seq
DB search
MNVVFRSLRVTVDRRVYRHISVSMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGRSRRREG
YSVYNKIYEYEYHLFGQNVTVSMTSVSGHLLSLEFKAPFQKWHSCNPVLLFDAEVEKYCP
ENFIPIKRTLEREVRQCQALVIWTDCDREGENIGFEVINVCKAVKPNLQVFRARFSEITP
NSIRRSCETLTEPDINVSDAVDVRQELDLRIGASFTRFQTLRLQKIFPQSLSDQLISYGS
CQFPTLGFVVERFKAIQAFVPETFFKIKVVHEPNEEESVEFSWKRHRLFNHTACLVLYQM
CMEDPMAKVISVTSKPKSKWRPLPLDTVELEKLASRKLRISAKETMKIAEKLYTQGFISY
PRTETNMFPQNLNLTTLVEQQTQDNEWGNFAQRILESGGPTPRNGNKSDQAHPPIHPTKY
TNSLQGNEKRLYEFIVRHFLACCSKDAQGQEVTVEIEIAEERFSASGLTIIARNYLEVYP
YDKWYNKVIPLYTADTTFQPTAIEMVEGQTSPPQLLTEADLISLMEKHGIGTDATHAEHI
ETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKDK
ASVLSYHVAKYKAVFIESVRKAKKLDEALSNYLGPAQEITEQEQGDMEIPLPVRKCPQCN
RDMVLKKKKDSTRMFLSCMGYPACKAAVWFPDTVLEVSRDESICPTCHPHPVHMLKLKFK
RGSLPPMMPLEFVGCIGGCDETLREVLNLRYIRGGEADSVSRAHNGSGSNQHQVPRTNSA
PPSRVTPPAPGANGSRPPASLPPPRATHPPAPAQGGAIVCNCGQDALLLTVRKEGPNQGR
QFYKCNTGDCKFFLWADLPAEQPASGGNRGPMTQNPQPPRPSIGFGNVPQQRQNNRGSGG
EDGETMCNCNEPAVTRTVMKDGPNKGRMFHTCGKPRDQQCGFFQWANENVAPATVFSGGS
GARPPGNKKASTSSNKPPTAKRPRTCGICHEPGHTRVTCPQGK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtgtttagatctctaagagtgacagttgaccgtcgagtttatagacacata
tctgtaagcatgataagacgcacacagattaagaaagtgctctgtgttgctgagaaaaac
gacgcagctaagggcatcgcagagatcatgtccaacggtagatcgagaagaagagaaggc
tactctgtttacaacaaaatatatgagtacgagtaccacctctttggacaaaatgtaacc
gtaagcatgacatctgtgtcaggacatctcttgagtcttgaattcaaagctccctttcag
aaatggcatagttgtaatccagtcctgttgtttgatgctgaggtggaaaagtactgccct
gaaaactttatacctatcaaaaggactctggagagagaggtgagacagtgccaagctctg
gtcatttggactgattgtgacagagaaggggaaaatatcggctttgaggtcattaatgtt
tgcaaagcagtgaagccaaaccttcaggtcttccgtgcacggttctctgagatcaccccc
aactccataaggagatcctgtgagacccttactgagccggacatcaacgtcagcgatgcg
gtggacgtgagacaggagctggatctccgcattggggcttcatttaccaggttccagact
ttacgcttgcagaagattttcccacaatccctctctgatcagctcatcagttatggcagt
tgtcagttcccgacccttggcttcgtggtagagcggtttaaagccattcaagccttcgtc
cctgaaactttctttaaaatcaaagttgtccatgagcctaatgaagaggaatcggttgaa
ttcagctggaaaagacatcgtcttttcaatcacacggcatgccttgtgctgtatcagatg
tgcatggaggatccgatggcgaaagtgatatctgtaacaagtaaaccaaaaagcaaatgg
cgacctttacctcttgacactgtggaacttgaaaaactggcttcaagaaaactgaggata
agtgccaaagaaaccatgaaaatcgcagaaaagctgtacacccaagggttcatcagttat
cctcgtactgagaccaacatgtttccacagaacctgaacctaaccacgctggttgagcaa
cagacacaagataatgaatggggaaattttgctcagcgcattttggaaagcggtgggccc
acacctcgaaatggaaacaaatctgatcaggcccatccccccattcaccccaccaaatac
accaacagtttacagggaaatgaaaagcggctgtatgagttcatagtacgtcacttcctg
gcctgttgctccaaagatgctcagggacaagaggtgacggtcgagattgaaatagctgaa
gagagattctcagcgagtggattgacgatcattgctcgcaattatctggaagtgtaccct
tacgacaagtggtacaataaggttattccattatatacggctgacaccacgttccagccc
acagcgattgagatggtggaaggacagaccagtccaccacagcttctgaccgaggctgat
ctgatctcgctaatggagaaacatggcattggtaccgatgcaacacatgctgagcacatc
gagaccataaagagtcgcatgtacgtggggctgacggcggaccagaggttccttcctgga
gaacttggcatgggtctcgttgaagggtataattcaatggggtatgagatgtctaaacca
gacctgagagcggagctggaggctgaccttaagcttgtatcagagggccgaaaggacaaa
gcctctgtcctcagttatcatgtggccaaatacaaggctgtttttatcgagtctgtgagg
aaggcaaagaagttggatgaggctttgtcaaattatctgggccctgctcaggagattact
gaacaggagcaaggagatatggagatacccttaccagtgcgaaagtgtccacagtgtaac
cgtgacatggtcctgaagaagaagaaagacagcaccaggatgtttctttcatgtatggga
tatcctgcctgtaaagcagctgtctggtttccagacaccgttctggaggtcagcagagat
gagagcatctgtccaacttgccatccacatccagtgcatatgctgaaacttaaattcaag
aggggaagtttgccacctatgatgccccttgagtttgttggatgcattggaggatgtgat
gagactctcagagaggtcctaaacttgagatatatccgaggaggagaagcagattctgtc
tctcgggcacataacggctctggatcaaatcagcatcaagtacctagaaccaactcagca
cctccatccagggttacacctccagcacccggagccaacggcagccgccccccggccagt
ctgcctcctccacgggcaacacatccaccagctccagcccagggtggtgcgattgtgtgt
aactgtggtcaggatgcccttcttctcactgttcgcaaagagggtcctaatcaaggccgt
cagttttacaagtgtaacacaggagactgcaagttcttcctgtgggctgatctgccggct
gagcagccagcgtccggaggaaacaggggacccatgactcaaaatccccaacctcccagg
ccctcaattggctttgggaatgtacctcagcagaggcaaaataacagaggatctggaggt
gaagatggtgaaactatgtgtaactgtaatgagcctgcagtgaccaggaccgtcatgaaa
gatgggccaaacaaagggcgaatgttccacacctgcgggaaaccacgtgatcagcagtgt
gggttcttccagtgggccaacgaaaatgtggctccagccacagttttctctggaggaagt
ggtgcccgacctcctgggaacaaaaaggccagtacttcttcaaacaaacctcccacggcc
aaaaggccaagaacctgtggaatatgtcatgagccgggtcatacacgggtcacctgtcca
cagggcaaatga
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