KEGG   Carassius gibelio (silver crucian carp): 127956139
Entry
127956139         CDS       T08819                                 
Name
(RefSeq) transportin-3 isoform X1
  KO
K15436  transportin-3
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
cgib03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127956139
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127956139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cgib03016]
    127956139
Transfer RNA biogenesis [BR:cgib03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    127956139
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N Importin_rep_3
Other DBs
NCBI-GeneID: 127956139
NCBI-ProteinID: XP_052409832
LinkDB
Position
B4:complement(19416998..19433118)
AA seq 923 aa
MEGGKPTLPLVFQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHTSLRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMP
SWKGCVHTLIEKYSNDVSSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTTV
VTLLVTCAEKSGHNEKMFIKVFRCLGSWFNLGVLDNNFMASNQLLMILFQVLQRDETSTN
LHEAASDCVCSALYAIENVAIHMPLAMQLFQGVLSLETAYHMAVAREDLDKVLNYCRIFT
ELSETFLEMTVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKMNDPA
IHRIFKPYIQRLLHSLARHCQLDPDHEGVPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKEGNPPWEVTEAVLFIMAAIAKSIDPENNPTLTEVLEQVVLLPETVHIAVRYT
SIELVGEMSEVIDRNPCMLDPVLIFLMKGLREKPLASVAAKAIHNICSVCRDHMAQHFQG
LLNIARALDSFALSTEAAVGLLKGTALVLARLPLEKIAECLNDLCAVQVMALRKLLAQDS
NSGKSSDPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQNDNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLVTRFVQRSPVTLLSSSIIVHIIQCA
IAATTLDHRDANCSVMKFIRDLIHTGVTNDHEDDFETRKRLIGQVMEQHGQQLVTQLINT
CCFCLPPYTLPDVAEVLWEIMLFDRPTFCRWLETTLKGLPKETAGGALSVTNKQLTDFHK
QVTSAEECKQVCWAIREFTRLYR
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggaaggcgggaaacccaccctgccgctggttttccaggccgtgcaggcgctgtaccac
gacccggaccccgccggcaaggagcgcgcctcggtctggctgggagagctgcagagatcg
atgtatgcatgggagatctcggatcagcttctgcagctgaagcaggacgtggaatcgtgt
tacttcgcggcccagacaatgaagatgaagatccagacgtcgttctacgagcttccccca
gagacccacacctcactgagagattcgctcctgtctcacatccagaacctcaaagacctg
tctccaatcatcgtcacacagcttgcattggcaatcgcagatctggctcttcagatgccc
tcgtggaaaggctgtgttcacaccctcatagaaaaatacagtaacgatgtgtcctccatg
cctttcttgattgagatactcaccgttctgccagaagaggtgcatagccgctctctgagg
attggagccaatcgacggacagagatcattgaggatctggcctactactctaccacagtg
gtcacgcttctggtgacgtgtgcggagaagtccggacataatgagaagatgtttatcaag
gtgttccggtgtttgggcagctggtttaatttaggagtgctggacaacaacttcatggcc
agcaatcaattgctgatgattctctttcaagtgctgcagagggatgagacgtccacaaac
ttgcatgaggcggcatcggactgcgtgtgctcagcactgtatgcgatcgagaatgtggcc
atacacatgcctttggccatgcagctcttccagggagtcctctctctagaaacggcttac
cacatggctgtagcccgagaggacctcgataaggtgctaaattattgccggatctttacg
gaattgtccgagacatttttggagatgactgtaaggactcctggccagggcatgggagat
ctacgcaccctagagttactgctgatttgtgctggccatccccagtatgaggtggttgag
atctcgttcaacttctggtaccgtctgggagaaaatctttataaaatgaacgatccagcg
attcacagaatattcaagccgtacatacagagactactgcacagtctcgcccgccactgc
cagctcgacccagatcatgaaggagtgccagaggacacagatgatttcggggagttcagg
atgagagtgtctgatcttgtgaaagatgttattttcctagtaggatccatggagtgtttc
tctcagctgtattcgactctgaaggagggaaaccccccatgggaagtaactgaggctgtt
ctgtttatcatggctgccatagctaagagtatcgatcctgagaataatcccactctgacg
gaggtgctggagcaggtagtgttgcttcccgaaacggtccacattgctgttcgctacacc
agcatcgagctagttggcgagatgagcgaagtgattgaccggaacccttgcatgttagat
cctgttctgatcttcctgatgaagggtttgcgggagaagccgttggcctctgtggcagct
aaagccattcacaacatctgctcggtgtgtcgagatcacatggcacagcacttccagggc
ctgctgaacatcgcccgcgcgctcgactcattcgccctgtccacagaagctgcagttggc
ctgctaaaaggcacagcgctggtgttggcccgcctgcccctggagaagatcgcggagtgt
ctgaacgatctgtgtgcagttcaggtcatggcactgaggaagctgctggctcaggactcc
aatagtgggaagtcatcagaccccactgtgtggctggacagactggctgttatcttcaga
cacacaaaccccatcgtagagaatggacagacacacccctgccagaaagtcattcaagag
atctggccagtgttgtcggagacgctaaatgcccaccagaatgataacaggatagtggag
cgctgctgccgctgcttgagatttgcagtgcgttgcgtaggcaaaggctctgcgtcccta
ttacagccacttgttactcagatggtgagtgtgtaccaggtgtaccctcactcctgtttc
ctgtacctgggcagcattctagtggatgagtatggcatggaggaaggatgcagacaaggc
ctgttggatatgctacaggctctctgtatgccgaccttccagctgttagagcagcctaat
ggactgcgcaatcaccccgacacagtggacgatctttttagacttgtcacaaggtttgtc
cagcgtagtccagtcacgttgctgagcagcagtattatcgtccacatcatccagtgtgcc
atcgctgccaccaccctggaccatcgagatgccaactgcagcgtcatgaagttcatcaga
gacctcattcacaccggggtcaccaatgaccatgaggatgactttgagacacgaaagcgt
ctgattggccaggtgatggagcagcatgggcagcagctagtgactcagctgatcaacacc
tgctgtttctgcctgccgccttatactcttcctgatgtggcggaggttctctgggagatc
atgctctttgatcggccgacgttttgtcggtggctggaaaccacactgaagggtcttcca
aaagaaacagcaggaggcgctttatccgtcacaaacaagcagcttaccgacttccataag
caggtcacgagtgcagaggaatgtaaacaggtttgttgggcaataagagagttcaccagg
ctgtaccgatag

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