Carassius gibelio (silver crucian carp): 127956190
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Entry
127956190 CDS
T08819
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127956190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127956190
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127956190
mRNA degradation factors
5'-3' decay
Decapping complex
127956190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
127956190
NCBI-ProteinID:
XP_052409929
LinkDB
All DBs
Position
B4:15461976..15470689
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AA seq
499 aa
AA seq
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MTASTVGGGSCLSMSLSALKRLDPYISSITDLASQVALYTFNNTTNEWEKTNVEGTLFVY
NRFASPRHGFTILNRLSMDNLTEPITKDLDFQLQHPFLLYRNARLSIYGIWFYDNKDCQR
IAELMKKLAGQEQQLQPLMAVGSVSPRSAEQGVDIMQMLTKARDDYDKGKLSEPKEIGSG
GVIYGNPHLIKPIPLKPAQDTHIQGQMQQDTEMDTKHLSVVNLFGAHSKPDSVSPQPTST
VSRVGPARPAVARSLSYDDPSPAGGAVVSNTPMQHCPAIHKLMSGSLLQPLSESPESRLC
ENGAVQNQPDPIQKLLMNPLPVAGTPGMPSLQLNQGESGVGPQIHPKAKASGPIPTQHLL
YVPNKAPPAGVAGNVVSPHELLQRLTLVQQEQELLPHQELLQPSLTTSSSNLSKTNSTQV
SSPQRIPATVAPTLLLSPSVFTQTKTTRAEPEPVEIRALSRTQLQATLLHLIKNDASFLD
TIYEAYVSRLATDSSSKPF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaagcacagttggcggcgggagctgtttatccatgagtctgtctgccctaaag
agactcgacccctacatcagcagcatcacagacctggccagccaagtagcactttacacc
ttcaacaacaccactaatgaatgggaaaagacaaatgtggagggaactctgtttgtctat
aacaggtttgcctcccccaggcacggcttcaccatcctgaatcgtttgagcatggacaac
ctgaccgaacccatcactaaagacttagatttccagctgcagcatccatttctcctgtac
aggaacgctcgcttgtccatctatggcatctggttctacgataacaaagactgtcagcgt
atagcagagctcatgaagaagttggcagggcaggaacagcagttacagccgctaatggca
gttggctctgtctctccgcgatctgcagagcagggtgtggatataatgcagatgctcact
aaagcacgagatgactatgataagggaaaactcagtgagccgaaagaaattggcagtggt
ggcgtcatctatggaaacccccatctgatcaaacccattcccctcaaaccagcacaggac
acacacattcagggacaaatgcagcaggacacagagatggacacaaagcacctctcggtt
gtcaatttgttcggtgctcattcaaaaccagactccgtctcaccacaacccacctcaact
gtcagtagggtgggtccagcgcgtcccgcggtggcccgttcgctgtcatatgatgaccct
tctcccgcaggtggcgctgtggtgtccaacacccccatgcagcactgcccagccatccac
aagctcatgtctggttcactgctgcagcctctctctgaatccccagagagccgcctgtgt
gaaaacggggccgtccagaaccagcctgacccgatacaaaaactgctaatgaacccgctc
cctgtggcagggactccagggatgccttccttacagttaaatcagggagaaagtggggtg
gggccccaaatccaccctaaggctaaagcctcagggccaatcccaactcagcacttgctc
tatgtcccaaataaagcaccccctgctggagtggcagggaacgtggtgtcgccacatgag
cttctgcagaggctcacattggtgcagcaggagcaagagctcctccctcatcaggagctt
ctacagcccagtctcaccaccagcagctccaatctcagcaaaactaattctacacaggtg
agctcacctcagcgcatcccagcgactgtagcccccaccctgcttctgtcacccagtgtg
ttcacccagactaaaaccacaagagcagaaccagaaccagttgagatcagagctcttagc
aggactcagctacaggccacgctgctccacctcatcaagaatgatgcctcattcctggac
accatctatgaagcatatgtctcccgtcttgctacagactccagctcaaaacctttctga
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