KEGG   Carassius gibelio (silver crucian carp): 127956190
Entry
127956190         CDS       T08819                                 
Name
(RefSeq) mRNA-decapping enzyme 1B
  KO
K12611  mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127956190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127956190
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127956190
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     127956190
SSDB
Motif
Pfam: DCP1 mRNA_decap_C WH1
Other DBs
NCBI-GeneID: 127956190
NCBI-ProteinID: XP_052409929
LinkDB
Position
B4:15461976..15470689
AA seq 499 aa
MTASTVGGGSCLSMSLSALKRLDPYISSITDLASQVALYTFNNTTNEWEKTNVEGTLFVY
NRFASPRHGFTILNRLSMDNLTEPITKDLDFQLQHPFLLYRNARLSIYGIWFYDNKDCQR
IAELMKKLAGQEQQLQPLMAVGSVSPRSAEQGVDIMQMLTKARDDYDKGKLSEPKEIGSG
GVIYGNPHLIKPIPLKPAQDTHIQGQMQQDTEMDTKHLSVVNLFGAHSKPDSVSPQPTST
VSRVGPARPAVARSLSYDDPSPAGGAVVSNTPMQHCPAIHKLMSGSLLQPLSESPESRLC
ENGAVQNQPDPIQKLLMNPLPVAGTPGMPSLQLNQGESGVGPQIHPKAKASGPIPTQHLL
YVPNKAPPAGVAGNVVSPHELLQRLTLVQQEQELLPHQELLQPSLTTSSSNLSKTNSTQV
SSPQRIPATVAPTLLLSPSVFTQTKTTRAEPEPVEIRALSRTQLQATLLHLIKNDASFLD
TIYEAYVSRLATDSSSKPF
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgactgcaagcacagttggcggcgggagctgtttatccatgagtctgtctgccctaaag
agactcgacccctacatcagcagcatcacagacctggccagccaagtagcactttacacc
ttcaacaacaccactaatgaatgggaaaagacaaatgtggagggaactctgtttgtctat
aacaggtttgcctcccccaggcacggcttcaccatcctgaatcgtttgagcatggacaac
ctgaccgaacccatcactaaagacttagatttccagctgcagcatccatttctcctgtac
aggaacgctcgcttgtccatctatggcatctggttctacgataacaaagactgtcagcgt
atagcagagctcatgaagaagttggcagggcaggaacagcagttacagccgctaatggca
gttggctctgtctctccgcgatctgcagagcagggtgtggatataatgcagatgctcact
aaagcacgagatgactatgataagggaaaactcagtgagccgaaagaaattggcagtggt
ggcgtcatctatggaaacccccatctgatcaaacccattcccctcaaaccagcacaggac
acacacattcagggacaaatgcagcaggacacagagatggacacaaagcacctctcggtt
gtcaatttgttcggtgctcattcaaaaccagactccgtctcaccacaacccacctcaact
gtcagtagggtgggtccagcgcgtcccgcggtggcccgttcgctgtcatatgatgaccct
tctcccgcaggtggcgctgtggtgtccaacacccccatgcagcactgcccagccatccac
aagctcatgtctggttcactgctgcagcctctctctgaatccccagagagccgcctgtgt
gaaaacggggccgtccagaaccagcctgacccgatacaaaaactgctaatgaacccgctc
cctgtggcagggactccagggatgccttccttacagttaaatcagggagaaagtggggtg
gggccccaaatccaccctaaggctaaagcctcagggccaatcccaactcagcacttgctc
tatgtcccaaataaagcaccccctgctggagtggcagggaacgtggtgtcgccacatgag
cttctgcagaggctcacattggtgcagcaggagcaagagctcctccctcatcaggagctt
ctacagcccagtctcaccaccagcagctccaatctcagcaaaactaattctacacaggtg
agctcacctcagcgcatcccagcgactgtagcccccaccctgcttctgtcacccagtgtg
ttcacccagactaaaaccacaagagcagaaccagaaccagttgagatcagagctcttagc
aggactcagctacaggccacgctgctccacctcatcaagaatgatgcctcattcctggac
accatctatgaagcatatgtctcccgtcttgctacagactccagctcaaaacctttctga

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