Carassius gibelio (silver crucian carp): 127956293
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Entry
127956293 CDS
T08819
Name
(RefSeq) protocadherin-15-like isoform X1
KO
K16505
cadherin-related family member 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127956293
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Cadherin related
127956293
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
ECD
Stevor
Motif
Other DBs
NCBI-GeneID:
127956293
NCBI-ProteinID:
XP_052410090
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Position
B4:15749194..15765647
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AA seq
788 aa
AA seq
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MLTPWRLFLCQMALNVFYHIAKASLCLGGQDIFATVRENSPTGEIIANISINGDPGASIR
LCLTGENADWFYLDGRTIRLNSSFSRSLDREVLGSVLIAALTCYEDNVIRVWYKNIITKI
TIFHNGALLALSFLFQSRYRIMVEILNENDNMPYFLEDTIQPRYISELLSVNSMVFTVKA
RDGDGDTITYMTDKSTDDACYFRIDLPNSGMVILDKPLDYETKTQLQVVIFAVETTTKEK
YSTTATVTVNVVDGDDQYPQFQPCAPVYEDGDHNICTNPVYSVNITETDEDAVLYFSPGP
IRAEDGDKDILTPLVYSILSGDDKGRFTIDSKTGEISLRQRVENRLLTPSFKLRIMAAQV
NDPKKYSVATALVHVVSENRFPPFFNKTVYKGFLIESSSPATLVTTYGNQVLVVQAIDRD
FRDGINPKIHYTMQPLTGSNKLYHITQDGIVIAKTDQLRAFNRHILEVIATDEESGETAH
ASVDIEVLQRGQPVPRSPFGEERLFGDMHAGMAGGIAALVLIVAVIVLFLILWLAKRRRE
RRDPADRGAVALGKHPNVSLRWFQQVNSGHPISLIEDASYHNEAFIDHEYPSDLYTKTED
MLPASIRAYESERSTAPQDMLPILVLPEIIPTNTSSSALANGTAFGKSVSFKDDTGAAVE
TLPKNEGQIIIVCNQIENKADISTPVMKQDTFANTTGESPAEMFDVCCPDTSVRPREECM
FANANEDDEDDNDPYKNMASVIYSSDEDTGEDEPNDLSHYYKHGQNQFTVDHMKAMRLQI
EDSDESQA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaccatggagattgttcctctgccagatggcactgaatgtattctatcacatc
gcgaaagccagtttatgccttggtggtcaagacatatttgccacggtccgagagaacagt
cccactggagagatcatagccaacatcagtatcaacggagaccctggagcaagcatacgc
ctgtgtctcactggagaaaacgcggactggttttaccttgacggccgaacaatccgactc
aactcgtcgttttcaaggtccttagatcgagaggtcctgggatcagttttgatcgctgct
ttgacatgttatgaagataatgtaataagggtatggtataaaaacataataaccaaaata
acgatatttcataatggagcacttttagccctgagtttcttatttcagagtcgatatcga
attatggtggaaatactgaatgaaaatgacaacatgccatatttccttgaagacaccatt
cagccacgatatataagtgagttgctgagcgtaaactcaatggtgttcacagtaaaagct
agagacggcgatggagacacaatcacttatatgaccgacaaatctacagatgatgcctgc
tattttaggattgatctgcccaacagcgggatggtgatcctggataaacctttggactat
gagactaaaacccagctgcaggtggtcatatttgctgtggaaacgaccacaaaagaaaag
tacagcacaacagctacagtcactgtgaacgttgtagacggtgatgaccagtatcctcag
tttcagccgtgtgcacctgtttatgaggacggagatcataatatctgcaccaaccctgtg
tacagtgttaacatcacagagacagatgaggatgctgtgctctatttttctccggggccc
attcgtgctgaagatggagacaaagacatactgactcctctggtctacagtattctgtca
ggtgatgacaaaggcagatttacaatcgactctaaaacaggagagatctctctcaggcag
cgtgttgaaaacagactcctcacgccttcattcaagctccgcataatggctgctcaggtg
aacgacccaaagaaatattcggtggcgacggcactggtgcatgtggtgtcagagaaccgg
tttcctccattcttcaacaaaaccgtctacaaagggttcctcattgagagctccagccct
gccacgctggtcactacctacgggaaccaagtcctggtcgtccaggcaatcgacagggac
ttcagagatggaataaatccaaagatccattacacaatgcagcccctgacgggtagcaat
aaactttaccacataacccaggatggcattgtgattgcaaagacggaccaactcagagcg
ttcaaccgacacattctggaggtgattgcaacagatgaagagtcaggtgagacagcccat
gcttcagtggatattgaagtgctgcagaggggacagccagttcccagaagtccatttggt
gaggaacgtctgtttggagatatgcacgcagggatggccggcggcatcgctgcccttgtt
ctaatagtggcagtgatagtactatttctcatcctctggctggccaagagacgacgagag
agacgggatccagcggacaggggcgcagtagctcttgggaaacacccaaatgtgagctta
agatggtttcagcaggtcaattcaggacatcccatatcgctaatagaggatgcctcctac
cacaacgaggcattcattgaccatgaataccccagtgatttgtacaccaaaacagaggac
atgcttcctgcatcaatcagggcatatgagtctgaaaggtccacggcaccgcaagacatg
ctgcccatcctggtgcttccagaaataatacccacaaacacctcatcttcagcgctggcc
aatgggacagcattcggaaaatcagtctcttttaaagacgacacaggagctgcagtggag
actttgcccaaaaatgaaggacaaattataattgtatgtaatcaaatagaaaacaaagcg
gatatttcgacgcctgtcatgaagcaggacacttttgctaacactacaggagaaagtcct
gcagaaatgtttgatgtttgttgcccagatacttctgtaagacccagagaggaatgtatg
ttcgccaatgctaatgaggatgatgaagatgacaatgatccatacaagaacatggcctct
gttatttacagcagtgatgaagacacgggggaagatgagccaaatgatttaagccactat
tacaaacatgggcaaaaccagtttacagttgaccacatgaaggccatgagattacaaatc
gaggattcggatgaatcgcaagcctga
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