Carassius gibelio (silver crucian carp): 127956403
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Entry
127956403 CDS
T08819
Name
(RefSeq) F-box DNA helicase 1-like isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127956403
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127956403
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127956403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
F-box-like
AAA_19
F-box
Viral_helicase1
AAA_30
PhoH
AAA_11
ResIII
AAA_12
Kelch_2
Motif
Other DBs
NCBI-GeneID:
127956403
NCBI-ProteinID:
XP_052410220
LinkDB
All DBs
Position
B4:22346103..22355047
Genome browser
AA seq
1023 aa
AA seq
DB search
MESSMKGRAKRRHLGASECDDLVKNIKGNESLTQPFNVNLSNTDPNRGLQPRTPTKRSRQ
APGGVGQQKGITSFYAVTGVISTSPQKGTKTPVKDEEEEQELIGHLIPKEENVEEEKIED
YMEGITEDMFNEDFDIGTSVTSVKKEDDFLEVTVRKEEDEEDLVEALPDAHYGLLGVQGG
HEVPKGHFQDLPEEVLRDVFAHLPADDLYRNISLVCQHWRAVVMDPRFLPWKKLYCRYRK
QQNEALMEVKSILDDNQINKKDDLCLLNMLRYMSQFKHSKCVNVKDVLACIKGHQLYAQA
EACIKDRIPDLVDNEGPNPWSAMALILILADGVKDILDLVALLQKSGCLLTAGGISEYLW
AVATLLLAMKNNNINISNRWHYNIFYVLHLMENAPPPAGLQDKRQLITHEQQQILNHDIQ
NNHVVKIMAFAGTGKTTTLVKYAQHRPHMRFLYLAFNKSVAMQAQRSFPYNVECSTVHSM
AFRAVGVRYKNMRKLSNNLQVFDVAWVLPEGLGGFVNAKVVTQTLHTFWASVDTCVGSEH
VPHKYKNTHGMSEYPDHHKKMAFATAAQKLWDKMVELKSRKERVYNMTHDGYLKLWQLSR
PQLDRYDAIFIDEAQDCTPVIMGIMLSQNCGKILVGDPHQQIYTFRGAVNALHAVPHTHI
YYLTQSFRFGSEIAYIGAAILDSCKKVKQILVGGNQDGSVRGEDTQTLQHLKLGQRLPEG
SVAILSRCNVTVFSEAVRLTDANPSCKIYIVGGVEYFGLDKIMDIWVLMQPEDKRKNESL
LIKDYFIRTFCKDKMGGFIGLKGYATASEDRELEGKLAVVEKYNKRIPELVNRIKDRAQK
SPVYADFILGTVHKAKGLEFDTVVVTDDFMKVPCARHNLQRIGGFNAANVPDDEWNLLYV
AITRAKRALYITKTISNILTFTGEYFLRSRLTSTLLSKDPSVVCSIKGCENHITADAVLS
MSKLPVRYVESVDAGGVLCLTCVEQRVGPAAFLLAPPERVRSMTYTNERIELPINIAMLL
SLL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgtccatgaaaggaagggccaaacgcaggcacttgggggcctcagaatgtgac
gatctggtgaaaaatatcaaagggaacgagtctctcacacagccttttaatgttaacctc
agcaacacggatccaaaccggggacttcagcccaggacccccaccaaaagaagcagacaa
gctccaggtggtgtgggacaacagaaaggcatcaccagtttctacgctgtcactggagtc
atcagcaccagtccccaaaaaggaaccaagactccagtgaaagacgaggaggaagaacag
gaactgatcggccaccttatcccaaaagaagaaaacgtagaagaggagaagattgaggac
tacatggaaggaatcacagaggacatgttcaatgaagactttgatataggaactagcgtt
acatctgtcaaaaaagaagacgactttttggaagttactgtgagaaaagaagaggatgag
gaggacctggtcgaagccctccctgatgcccactacgggctgctaggagtgcagggaggc
catgaggtgcccaagggccacttccaggatctgcctgaggaggtcctgagggacgtgttc
gcacacctcccagcagatgacctctatcgaaacatcagcctggtgtgccaacactggagg
gccgtcgtcatggacccccggtttctgccttggaagaagctgtactgcagataccgtaag
cagcaaaatgaggcgctgatggaggtgaagtctatccttgatgataatcaaattaacaag
aaggatgacctgtgtcttctcaatatgttgaggtacatgtctcagttcaaacacagcaaa
tgtgtgaatgtgaaggatgtgctggcgtgtattaaaggacatcagctctatgctcaagct
gaagcctgtatcaaagacagaatcccagacctggtggataatgagggcccaaacccctgg
tctgccatggccctgatactgattttggctgacggggtgaaagatatcttggacctggta
gctctcttgcagaagtctgggtgtctgctgaccgcaggaggaatctctgagtacctgtgg
gctgtggccactttgctcctggcaatgaaaaataacaatattaacataagcaacaggtgg
cattacaatatcttctatgtgctgcatttaatggagaacgctcctcctccggcaggcttg
caagacaaaagacagctgatcactcatgagcagcagcagatactcaaccatgacatccag
aataaccacgttgtaaaaataatggcttttgctggcactggaaagacgaccacactcgtg
aagtatgctcagcataggccacatatgcgcttcctctacctggccttcaacaaatctgtg
gcgatgcaagctcagcgttcattcccgtacaacgtcgaatgcagtaccgtccattcaatg
gcgttcagagccgtgggagtgaggtataaaaacatgaggaaactgtccaataatttgcag
gtgttcgatgtggcgtgggtcttgcctgaaggactcggaggattcgtcaatgctaaagtg
gtgacgcaaacactccatactttctgggcttctgtagacacctgcgttggttcagaacat
gttccacataagtacaagaacactcacggaatgtcagaatacccagatcatcacaaaaaa
atggcatttgctactgccgcacagaagttatgggacaaaatggtagagctgaagtccaga
aaagagagagtgtataatatgactcatgatggatacctcaaactctggcagctgagtaga
ccacagctggaccgatatgatgccatatttattgacgaagctcaggactgcacaccagtc
atcatgggcatcatgctttctcagaactgtgggaaaatcctggtcggagatcctcaccaa
cagatttacactttcagaggagcagtcaatgctttgcacgcagtccctcacacacacatc
tactatctcacacagagcttcaggtttggatctgaaattgcatacatcggcgctgcaata
ttggacagctgtaaaaaagtgaagcagatattggttggtgggaatcaggatgggagtgtt
cgaggggaggacacacaaacactgcagcatctgaagctgggacagaggctgccagaaggg
agcgtggccattctgagccgctgtaatgtcacagttttcagcgaggctgtccgactcaca
gacgccaaccccagctgcaagatctacattgtgggaggtgttgagtactttggactggac
aaaatcatggatatctgggtcctgatgcaaccagaggacaaacgcaagaatgagagcctt
ctgatcaaggattacttcatccgaactttctgcaaagataagatgggtggattcattggt
ctgaagggatacgccacagcttcggaagaccgcgagctggagggcaagctagctgtggtg
gaaaaatacaacaaacgcattccagagctggttaaccgcatcaaagatcgtgcccagaaa
agcccagtgtacgcagattttattcttggaacggtgcacaaggcaaaaggcctggagttt
gacacagtggttgtgacagatgacttcatgaaagtaccatgtgctcgacacaacctgcag
agaattggtggtttcaatgcagcaaacgtcccagacgatgagtggaacctgttatatgtg
gcgatcactcgagccaaaagagcgctgtacatcaccaagaccatcagcaacatcctcacg
ttcactggggagtacttcctaaggtcaaggctgaccagcactctgctgagtaaagaccca
tctgttgtctgctccattaaaggctgtgagaaccacatcactgcagacgccgtcctcagc
atgagcaaactccccgtcagatatgtggagagcgtggacgctggcggtgttctgtgtttg
acctgtgtggagcagcgtgtgggacctgcagccttcctgctcgctccaccagagagggtc
agatccatgacctacaccaatgaaagaatagagctgcccatcaacatcgccatgctgcta
tctttactttaa
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