Carassius gibelio (silver crucian carp): 127956427
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Entry
127956427 CDS
T08819
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127956427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127956427
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127956427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
127956427
NCBI-ProteinID:
XP_052410267
LinkDB
All DBs
Position
B4:9132340..9142286
Genome browser
AA seq
454 aa
AA seq
DB search
MAKRIAENELTDRNWDQEDEGEEAGMFSIASDDVMKNRAIKKARRRNVGAEGESGGSFKA
FKGFSLTPATGSTSFSGFGNGAGFKPLSSLTNGSVASVAPSFAGFNVPTSAKTNSGPLMF
NSSTPSKPTDGDVTSNGSAPSSKEYNRQLTALNCSVRDWITKHVNDNPLCDLNPIFRDYE
RHLASIEKKYGSCASESGVESTSFGGEQKQLLTGGKTASVSVSGTSAAVTASVSGAAPQL
FSFKDKDVAAPDKPAAVAPPGVSFNFGQKVDSSVLGTLASSGAPSFSFSSSSGVSVFGTA
VSSVSPAVSSSLNAASSSQTADENGEESEEPPVPVVKEIKEKDAFYSKKCKLFYKKDGEF
KEKGVGTLHLKMVAENKLQLLVRADTNLGNILLNIMVSSSMPCSRTGKNNVMVVCVPNPP
VDDKNPNTPVPVLIRVKTGEDADELHRTLQEKKA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacggattgctgaaaacgagttgaccgacaggaactgggatcaggaagatgaa
ggcgaggaggcaggaatgttttcaattgcgagtgacgatgtgatgaagaatcgcgccatc
aagaaagccaggcgtcgtaacgtaggagcagagggagagagtggagggtctttcaaagca
tttaaggggttctctctgaccccggccacagggtcgacatcgttctctggcttcggtaat
ggagctggtttcaaacctctctccagcctgaccaatggcagcgtagcatcggtggcccca
tcctttgctggttttaatgttcccacatctgcgaaaactaacagtggccccttaatgttc
aacagctccaccccctccaaacccacagatggtgatgtcacctctaatggctccgcccct
agcagtaaagaatacaaccggcagctcaccgcactaaactgctctgtgcgcgactggatc
accaagcatgtcaatgacaaccccctgtgcgacctcaaccccatcttccgtgactacgag
cgacacctggccagcatcgagaagaaatatggcagctgtgcatcagaaagcggggtggag
agcacgtcgtttggaggggagcagaagcagcttctgacgggtggaaaaactgcttccgtt
tctgtttctggcacgagtgctgctgtgaccgcgtctgtcagcggtgcagcgccacagctc
ttttcatttaaagacaaggatgttgctgcaccagacaaaccagcagccgtggctcctcca
ggcgtctcctttaattttggccagaaggtggacagctctgtgctaggcacacttgcgtcc
agcggagcaccgtcgttctcgttttcctcctcttcaggcgtgtctgtgtttggaacagcc
gtcagtagtgtcagtcctgcggtgtcatcctctctgaatgcagccagcagcagccagact
gcagacgagaacggagaggaatcggaggagccgcctgttcctgtggtgaaagagatcaag
gagaaagacgccttctactccaaaaagtgtaagttgttctataagaaggacggagagttt
aaggagaagggggtgggaacactgcatctgaagatggtggctgagaacaaacttcagctt
ttggtgcgagccgacaccaacctggggaacatcttgttgaacatcatggtgtcttcttcc
atgccttgctcacgaaccggcaaaaacaacgtgatggtggtgtgcgtgccaaaccctcct
gtggacgacaagaaccccaacacacccgtcccagtgctcatacgcgtgaaaacaggagag
gacgcggacgagctgcaccgaaccctgcaagagaagaaagcctaa
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