Carassius gibelio (silver crucian carp): 127956435
Help
Entry
127956435 CDS
T08819
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127956435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127956435
Transporters [BR:
cgib02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127956435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
RhodobacterPufX
Motif
Other DBs
NCBI-GeneID:
127956435
NCBI-ProteinID:
XP_052410277
LinkDB
All DBs
Position
B4:complement(9536967..9553979)
Genome browser
AA seq
599 aa
AA seq
DB search
MGKTGQSTVDLNSPSDVKQAVPFEDLDHNSVPAEEEKENKVPDRGSWKGKFDFLLSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFTTLVFAGIPLFLLETALGQYMSVGGLGVWKLIP
MMKGVGLAAVVLSFWLNIYYIVIIAWALYYLFSSFKAELPWQTCDNPWNTDRCFSNYSLM
DTTNLTSAVTEFWERNMHQLTNGLEEPGELRWPLVGTLALSWILVYFSIWKGVEWTGKVV
YFSATYPYFMLFILFFRGVTLPGAIDGVLFYVTPDFNKLLKSEVWLDAATQIFFSYGLGL
GSLIALGSYNSYNNNVYRDSVIVCCINSCTSMFAGIVIFSIVGFMSYITKRPIEELAASG
PGLAFLAYPQAVTQLPMSSLWAILFFSMLMMLGLDSQFCTVEGFITALMDEYPTVLRKRK
KLFILMVCIISFIIGFSNITQGGLYVFKLFDYYSASGMCLLYLVFFETISISWFYGAERF
YKNIEDMIGYRPCGFWKYCWTYFTPIICLGVFTFSAIEMTPLTLGKYVYPTWGQGIGWLM
SLSSMVLIPAYIIYMFFTTKGSIRQRWHKMTKPTELTTSEINDSTQQSTRIGSTDEASV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggggaagactggccagagcacggtggacctcaactcaccctcagacgtgaagcaggca
gtcccgtttgaggacctggatcacaacagtgttcctgcagaagaagagaaggagaataaa
gtaccagatagaggatcttggaagggaaaatttgactttctactgtcctgcgttggatat
gccattgggctgggaaatgtgtggagattcccttatctgtgtggaaagaatggtggagga
gcttttctcatcccatacttcactactctggtctttgctggtatcccactgtttctgctg
gagacggcattaggacaatacatgtcagtgggggggcttggagtatggaaattaataccc
atgatgaaaggtgtgggtctagctgctgtggttttgtccttctggcttaacatctattac
atcgtcatcatcgcctgggctctctattacctcttcagctctttcaaagcagagttacca
tggcagacgtgtgataacccttggaacactgatcgctgcttttccaactacagtctgatg
gacaccaccaacctgaccagtgccgtcactgagttctgggagaggaacatgcatcagcta
acaaacggtttggaggaaccaggggaattgcgctggccgttggttggaacgctagcgttg
tcttggattcttgtctatttctcaatctggaaaggagtggagtggacagggaaggtggtc
tatttttccgccacgtatccttacttcatgctctttattctgtttttccgtggagtcact
ctccctggagcgatagatggcgtcctcttctacgtcaccccagacttcaacaaacttttg
aaatctgaggtgtggttggatgctgccacgcagatcttcttctcttatggtcttggttta
ggttctcttattgctcttggtagctacaactcatacaacaataacgtctacagagattct
gtcatcgtgtgctgtataaactcctgcaccagtatgtttgctgggatcgtcatattttcc
attgtgggcttcatgtcgtacatcacaaagagacccattgaagaactggctgcttcaggt
cccggtttggcatttctggcctatccacaagctgttacacagcttcccatgtcttctctc
tgggctattcttttcttctcaatgctcatgatgctgggattggacagtcagttttgtaca
gtggaaggcttcataactgctctaatggatgaatatcccacagtcctgaggaagagaaag
aaactcttcatcctcatggtctgtattatatccttcatcatcggtttctccaacatcacc
cagggcggtttatatgtattcaaattgtttgactactactcggccagtggaatgtgtctc
ctgtacctggtcttttttgagacaatttccatttcctggttttacggtgcagagagattc
tataaaaatatcgaagacatgattggttatcggccttgtggcttttggaaatattgctgg
acttactttactccgataatctgtttgggtgttttcactttcagtgccatagaaatgact
cctctgacactagggaagtatgtgtacccgacctggggtcagggcatcggctggctaatg
tccctctcttccatggttttgatacccgcatatatcatatatatgttctttactaccaaa
ggcagcatccgacagcgttggcataagatgaccaaacccacagaactcacaacatcggaa
atcaatgattccacacaacaatccacacgcataggaagtacagatgaagcttctgtctga
DBGET
integrated database retrieval system
