Carassius gibelio (silver crucian carp): 127956520
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Entry
127956520 CDS
T08819
Name
(RefSeq) transcription initiation factor TFIID subunit 3-like
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127956520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127956520
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127956520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_2
PHD_5
Motif
Other DBs
NCBI-GeneID:
127956520
NCBI-ProteinID:
XP_052410498
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All DBs
Position
B4:12316774..12362637
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AA seq
892 aa
AA seq
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MCESYARSLLRVSVAQVCQAVGWDAVQLSACDLLSDVLERYLQQLARSCHRYSELYGCTD
PGLTDVDQAFGLLGVSISELEDYVNNMEPVGFPQTIPQFPISKSSVLQFPAAGFETDARE
ALRGERRDYIPEYFPPLISLLEDEEEEEPVPADMGTSAEAMQVSLGEEEDVEEEENDENW
LSCHGGESPRPEGLLPAAKRPRLSSKPGVSPEWSYEPREPLSSLNSQHMPHSPSPPHSPE
LPRPPLAPPTPGQKPKLPSPSPARQKNKSPKRGAGSAPIGVLGRPLILTPPKSNQKAGKR
SPVRPKSPRSPKPSPALFGAAGRGWPGPPVDENSRDGQFRAHDTGDEDIENSIAAVIARA
CADGDGASDPFAYDSDSDSEGPKPAPKHILSHIKPPQVLTGKHPLPPVPPILNPPNRWTM
DDSIDEVIRKANQGQKPIQAPSLSPSEPTYLSSPPDSPPNPMPPLKPPQERKDPVTATLL
KKKLKKDIRVKLKKKDKERLKEKGKDKGKNKDKIKEKKREKERGQVEENNMPWLELLLGG
EERRDGISGKKEKDKHKDKKKDKEKSKKEKEKRDKGKERGKEEKRISQGTKDIAAAVGAT
SPLFSPQTCLRVPSMLPPLPPILPDKLFPHPKDNKSKEKDKKKDKKEKKKKKEKEKDREK
EREKEREKERIREKERDKEEKKKDKEKKEKTKEKEKDKPKLEKSSLLADVLPTVPPSPVI
PRLTLRVGAGQDKIVISKVVPDSEPTPPPPRTPVPRVIPAVRMRSPPAPPPPAPAPVAPP
PRPPPVLPPPPPAVPVLQAPSQAKARGCSVVTETVSAYVIRDEWGNKIWICPGCNKPDDG
SPMIGCDECDDWYHWPCVGILAAPPEDQSWYCVKCAGKKKDKKTKKRKRKAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagagttacgcgcgctcgctgctgcgcgtgtccgtggcgcaggtgtgtcaggcg
gtgggatgggacgcggtgcagctgagcgcctgtgatctgctgtccgatgtgctggagaga
tacctgcagcagctggcccggagctgccaccggtactccgagctctacggatgtacagac
ccaggactgactgatgtggaccaggcttttggacttttgggcgtcagtatatctgaactc
gaggactatgtaaataacatggagcctgttggcttcccacaaactatccctcagtttccc
atcagcaagagcagcgttctgcagtttcctgctgctggctttgaaacggacgcccgtgaa
gccctgaggggcgagaggagagactacatcccagagtacttccctccgctcatctcactg
ctggaagatgaggaagaggaggagccggttcctgcagatatgggcacttctgccgaggcc
atgcaagtctccctgggtgaggaagaggacgttgaggaagaggagaatgatgagaactgg
cttagttgtcatggcggagagagtccaaggcctgagggtctgttacccgccgccaagaga
ccccgcctgagcagcaaaccaggcgttagccccgaatggagttatgagccacgggaacct
ctcagttccctcaactcccaacacatgccccattccccctcccctccccactcccccgaa
ttaccccgacctcctttggcacctcctacacctggacaaaagccaaaattgccctcaccc
tctcctgcacgacagaagaacaaatcacccaaaagaggtgctggttctgcacccattggt
gtattggggcgaccacttatattgacaccacccaagtccaatcagaaggcaggaaagagg
tcacccgttagacccaaaagcccccgcagcccaaagccaagtcctgccctttttggtgca
gctggacgtggttggccaggacctcctgtagatgagaattctcgtgatggccagttcaga
gctcatgatacaggagacgaggatattgagaactctattgctgctgtgattgcacgggct
tgtgcagatggagatggcgcatcagacccatttgcttacgactcggactcagacagtgag
gggccaaaacctgcacccaaacatatactaagccacatcaaacctccacaagttcttacc
ggaaaacacccacttccaccagttcccccaattctcaacccacctaatcgctggacgatg
gatgactctatagacgaggtcatccgaaaggccaatcagggtcaaaagccaattcaggcc
ccaagtctttcaccttcagagcccacttacctgtcatccccacctgactctcctcccaat
ccgatgccacctctaaaacctccccaggaacggaaagaccctgttactgctacccttctg
aagaaaaaactcaaaaaggacatcagggtcaagttgaagaagaaagacaaagagagactc
aaggagaagggcaaagataaaggaaagaacaaggacaagatcaaggagaaaaagcgggaa
aaggagcgagggcaggtagaggagaacaacatgccctggctggagctattgctaggaggt
gaagaacggagagacggcattagcgggaagaaagagaaggacaagcacaaagacaagaaa
aaagataaagagaaaagcaagaaagagaaagaaaaacgagacaagggcaaggagcgaggc
aaggaagagaagaggatatctcaaggaaccaaagacatcgccgctgccgtaggcgccacc
agcccgctcttcagcccccagacttgcctacgtgtcccgtcaatgttgccccctttgcca
ccaatactccctgataaattattcccacaccccaaggataacaagagcaaagaaaaggac
aagaagaaggacaagaaagagaagaagaagaaaaaagagaaggagaaagacagagagaag
gagcgtgaaaaggaacgggagaaggaacgaatcagggagaaggagcgagataaagaggag
aaaaagaaggacaaagagaagaaagaaaagacgaaggaaaaggagaaagacaagccaaaa
cttgagaaatcaagtttattggctgatgttcttcccactgtcccaccgtctcctgtcata
ccccgactgaccctcagagtgggcgctggacaagacaagattgtgatcagtaaggtggtc
ccagattcggagcccacccctccaccaccacggaccccagtgcccagggtcattccagca
gttcggatgcgttcccctcctgctccccctccacctgccccggctcctgtagcacctcca
ccccgccctcctcctgtcctgccccctccacccccagccgtccctgttctgcaggcaccc
agccaggccaaagcacggggatgcagcgtcgtaacagagaccgtcagtgcatacgtgatt
cgggatgaatgggggaataagatctggatttgtccaggatgtaataaacctgatgacggc
agtcccatgatcggatgcgacgagtgtgacgactggtatcactggccctgtgtgggtatt
ttagccgcccctccggaggaccagtcgtggtactgtgtgaaatgtgctggcaagaagaaa
gacaagaagacaaaaaaaaggaaacgcaaagcgcactga
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