Carassius gibelio (silver crucian carp): 127956876
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Entry
127956876 CDS
T08819
Name
(RefSeq) notochord granular surface isoform X1
KO
K07610
desmin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127956876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
127956876
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
127956876
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF848
DUF677
DUF3450
Cwp8_D3
FTCD_C
DUF1664
Motif
Other DBs
NCBI-GeneID:
127956876
NCBI-ProteinID:
XP_052411091
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All DBs
Position
B4:complement(24491903..24496416)
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AA seq
512 aa
AA seq
DB search
MSHSPDRMSSYRRHFEGGLSSASTLQVRVSSPSPTRGAVRHRSASCSRRALSGTRKSRMT
SSVSMGALCLGMGLGVAGGAVDLDAAAAENQAFLSTRTSEKKEMVVLNDRLAVYIEKVRS
LEQSNKLLEAEIDGIKSHHVKPSGLRLLYEDQLRELRRIADQMKVQRDLAVAAKDAMAGQ
LEMVKVKYEEAVEARKKAEFEIEAFRPDVDAATSARIALEKRLENLEVELEFLQRIHKKE
IEELMAQIYGSVAKVDVAFSLPDLASALKQIQAQYDSIAAQNLQEMDAWYKAKFQDLNKA
TSRHVETARSVREEITAYKREIQNKQRELDALKNRNEALLLQIKEAQERHKKEEEELQIR
IDTLKEELKSIKGKIALLLREYQDLLNVKMSLEIEITTYRKLIEGEDSRLSSMVSGLSLM
SVSAGMVSDVFGAAAAHSGAVSSAASEKMLSSSTTVDHNHHESLEEFTHEQAVEMTERKT
VLIRTVKTDEDTFQSDTQERTITISGAADEND
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacagcccagacaggatgtcttcctaccgccgtcacttcgagggtggcctgagc
tccgcgtccacgcttcaggtgcgggtctccagcccttcacccacccgaggagcagtgcgc
caccgctccgccagctgctctcgcagggcgctctccgggacccgcaaatcacgcatgacc
agcagtgtgagtatgggagcgttgtgtctgggcatgggtttgggggtcgctggaggtgcc
gtggacctggacgctgcagctgctgagaaccaagctttcctcagcacacgcaccagtgag
aaaaaggagatggtcgtcctcaatgaccgcctggctgtatacatcgagaaggtgcgctct
ctggagcagagcaacaagctgctggaggcagaaatcgatggcattaagagccaccatgtg
aagccgtctggtctgcgactgctctatgaggaccagctgagggagctgaggaggattgct
gaccagatgaaagtccagcgggatctggcggtagcagcaaaggatgccatggcaggtcag
ctggaaatggtgaaggtgaaatacgaggaggctgtggaggccaggaaaaaggcagagttt
gaaattgaagccttcagaccggatgtggatgcagccacatccgcccgaattgccttggaa
aaacggctggaaaacctggaagtggagcttgagttcctgcagaggattcacaaaaaggaa
atcgaggagctgatggctcagatttatggatcagtggctaaagtagatgtggccttctct
ttgcccgatctggcatctgccctcaaacagatccaggctcaatatgacagtatcgccgct
caaaacctgcaggagatggatgcttggtataaagcgaagtttcaagatctaaacaaagca
acatcacggcacgtggaaacggcgaggagcgtcagagaggaaatcacagcctacaagaga
gagattcagaataaacagagagaactggacgctcttaagaacaggaatgaagcactgctg
ctccagataaaggaagcacaggagagacacaagaaagaagaggaggagctacagatccgt
attgacactctaaaggaggaactgaagtctattaaggggaagattgcacttctactgaga
gaataccaggatctgctcaacgttaagatgtcgctggagattgaaatcaccacatacagg
aagctgatagagggagaagacagtcgcttgtccagtatggtgagcggtctgtctctcatg
agcgtgagcgcaggaatggtcagcgatgtttttggggcagcagcagcccacagtggagca
gtgagctcagctgcctctgagaagatgctctccagcagcacaacagttgaccacaaccat
cacgagtctctggaggagttcactcacgagcaggctgtggagatgacggagagaaagacc
gtcctcattagaacagttaagacagacgaggacacctttcaaagcgacacacaagaacgt
accatcactatctctggtgctgcagacgagaacgattga
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