Carassius gibelio (silver crucian carp): 127956979
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Entry
127956979 CDS
T08819
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgib00535
]
127956979
Proteoglycans [BR:
cgib00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
127956979
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Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_14
LRR_5
LRR_9
DUF952
DUF7409
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
127956979
NCBI-ProteinID:
XP_052411274
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All DBs
Position
B4:17815731..17818841
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AA seq
344 aa
AA seq
DB search
MFALGFFLLAGLLCQSLGQYDYYDEYYVPYAPMEAVSSPNCAQECECPFNFPTAMYCNDR
NLKFIPIVPSGIKYLYVQNNLIEEIKTGVFDNATELRWLVLDNNNITSSKIQAGTFDKLI
KLEKLLFSNNKLTKPPSPLSKSLDELKLNGNQLSSFPANTLSGMENLTTIHLSENKLTTE
SITGAFKGLKSLVLLDVSENKLKKLPSGVPPSLLMLYADKNDIDSIPSGYLAKLPVLQYL
RVSHNKLVDSGIPAGVFNVSSLLELDLSFNKLKSIPEINESLEHLYLQVNEINKFDLTNI
CKFSSPVNYSRLRTLRLDGNNVTHRSMPDDTANCLRQASEIIFD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcttggcttcttcctgttagctggactgctatgtcagagtttgggtcaatat
gactactatgatgaatactatgtcccctacgcaccaatggaggcagtatcgtctcctaat
tgtgcccaggagtgcgaatgtccattcaacttccccactgctatgtactgcaatgaccgc
aacttgaagttcatccctattgttccaagtggcattaaatacctctacgtacagaacaac
ttaattgaggagatcaagactggcgtgttcgataacgccacggagcttcgctggctcgtc
ctggacaacaacaacatcaccagcagcaagatccaagctggtacctttgataaactgatc
aaactggagaagctcctcttcagtaataacaagttgaccaagccccctagtcctctttcg
aagtctctggatgagttaaagttgaacggcaaccagctgagctcgttccctgctaacacc
ctgtctgggatggaaaacctgaccaccatccacctgtctgagaacaagctgaccaccgag
agcatcacaggtgccttcaaaggcctgaagtccctggttctgctggatgtgagcgagaac
aagctaaagaaacttccctcaggagttccaccttcgcttttgatgctctacgctgacaaa
aacgatatcgacagcatccctagcggctacctggccaagctcccggtcctgcagtacctg
cgtgtctctcacaacaagctggtggactctggaatccctgcaggtgtgttcaacgtgtct
tctctccttgagcttgacctgtcttttaacaagctgaagtccatcccggagatcaacgaa
tcgcttgagcacctgtacctgcaagtcaacgagataaacaagtttgacctgacgaatatc
tgcaagttcagctctccggtcaactactctcgactccggaccctgcgcttggatgggaac
aacgtcacacaccgcagtatgccagatgacacagctaactgcctacgccaggcctcagag
atcatctttgattaa
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