Carassius gibelio (silver crucian carp): 127957033
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Entry
127957033 CDS
T08819
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127957033
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127957033
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127957033
04121 Ubiquitin system [BR:
cgib04121
]
127957033
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127957033
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127957033
Membrane trafficking [BR:
cgib04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
127957033
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127957033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
MFS_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
127957033
NCBI-ProteinID:
XP_052411326
LinkDB
All DBs
Position
B5:40087316..40092823
Genome browser
AA seq
501 aa
AA seq
DB search
MPWCKCGATDKLVRELLRTRSAARNKMMKNWGVIGGVAAAMAAGVYVLWGPISDRKKKRK
RMVPGLLNLGNTCFMNSLLQGLAACPSFIRWLEDFTSESSVHPERTDKETHLSSSLIQLL
KALSSHDPGEDYVLDAGGLLEALRLYRWHISSFEEQDAHELFHVLTSSLEEEQEHQPRVA
HLFDMQTLEKSVESKEKNISCRSGGPLHPIPSLWRTRHPFHGRLTSYMACKRCERQNPVH
YDSFDSLSLPIPSVQWSRPVTLDQCLQHFISSETIKEVECENCTKQQAGELVNGEVLESQ
RTTFVKQLNFGKLPQCLCIHLQRLTWSKEGTSIKRQEHVQFTEYLSLDRYKHCTAGHNLQ
TNSRTNGPKALGDPKHRTIANGVDSEHCNNNKPLSNGTFPSIFLHSPGLSSQLNLTYDYS
SSEYLFCLTAVLVHHGDMHSGHFVTYRRCPAAPCGTSAFSSQWLWVSDDFVRKASLQEAL
SSSAYLLFYERVRRLGLRVEE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccttggtgcaaatgcggagctacagacaagctcgtccgagagttattacgtactaga
tccgctgcaaggaacaagatgatgaaaaactggggtgtgattggtggagtagctgctgcc
atggctgctggagtctatgtattatggggcccaatttcagacaggaagaaaaagagaaaa
agaatggttcctggtctgcttaatctggggaacacgtgctttatgaactcacttctccag
ggcctggcagcgtgtccttccttcatcagatggcttgaagactttacaagcgaaagcagc
gtccatccagagagaacggataaagagactcatctgtccagctctctgattcagttactt
aaagccctgtcaagtcatgatcccggagaagattatgttttagatgcgggaggcctctta
gaagctctcaggctttacagatggcacattagctccttcgaggaacaggatgctcatgag
ctctttcatgtcctcacatcttcattagaggaggaacaggaacaccagcccagagtcgct
catctgttcgacatgcaaacactggagaaatctgtggagtcaaaagaaaaaaacataagc
tgcagaagtggaggcccattacatcctattccaagtttatggaggactcggcaccctttt
catgggcggttaactagttatatggcttgtaaacgctgtgagcgacagaatcctgtgcac
tatgattctttcgacagcttgtctcttcctatcccgtcagtacagtggagcagaccagtt
actttggaccagtgtctccagcatttcatctcctctgaaaccatcaaggaagtggagtgt
gaaaactgtaccaagcagcaggctggagagcttgtgaatggagaagtccttgagagtcag
aggacaacatttgtcaagcagctgaactttggaaagttgcctcagtgcctctgcatccat
ctgcagagattgacatggtctaaagagggcacttccattaaaagacaagagcatgttcag
tttactgaatatttgtctctggatcgatacaaacactgtacagctggtcacaacctccag
accaacagcagaacaaatgggcccaaagctctcggagacccaaaacacagaaccattgct
aacggtgttgattcagagcactgtaacaataataagccactgtccaatggaacctttccc
tccatctttctgcactcaccaggactgagctcacagctcaacctcacttatgactacagc
agctcagagtatctcttctgcttgacggccgtcctggttcatcatggagacatgcactcc
ggacactttgtcacttaccgccgctgccctgcagctccctgtgggacgtctgcttttagc
tcccagtggctctgggtgtctgatgattttgtaaggaaagccagtctccaggaggcgctc
tcctccagcgcatatctgctcttttacgaacgagtgcgaaggcttgggctgagggtggaa
gagtag
DBGET
integrated database retrieval system
