Carassius gibelio (silver crucian carp): 127957148
Help
Entry
127957148 CDS
T08819
Name
(RefSeq) PDZ domain-containing protein 2-like isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127957148
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
127957148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
127957148
NCBI-ProteinID:
XP_052411512
LinkDB
All DBs
Position
B5:29899879..29966757
Genome browser
AA seq
2467 aa
AA seq
DB search
MPITQENALSHLPLLENWLWAREKDRDEGSEPQMSTGCVCKAAIRKLVEYIQLNFAELES
PLYTSRQFREEIDVEVRAVYLNKSEEDGPEFGLSFGNIPIFGDPEGKKKGVRRRRRKSDK
GPVLDVGCIWVTEVKKNSPAARCGEIKLRDELLSLNGQLMVGVDVTGASYLADQCWNGGC
IYLIMLRRIKRKAPLPPCNGSGGNSVDGSNDHRRNVSSEPAGSPTQNGQNGKRTRKFGVI
SRSSFTRDSKDSKDSQDFEHENGYSSMEAEVTSPESSTPQDTPTDDSPVIGSSVLMSSHM
KVGSTATLPSRSHSRLSESYKTESISSEPSSQPREGSRIWKMHMVKGQDGLGIQITGGRG
SKRSPHGIIVAHVEEGGATQRDGRLKAGDELLMINGHSLVGLSHQEAVAVLRSTAGLVQL
VVASRDESEVDFHKYPSTSLPDLVSTCSGPDASPSPGEEKENMEPDLEDVRASSLSLPTQ
DLFTDFDRLEERGRFEGPKGCCRSPTPMKFRSRSQGGGSRLESVGEDDELIVENGDAGSD
VAEKPARGGRKHSLPQQLDTAGIRQEYQIVKKSARSLSTVQVESPWRLAQPSIISNIVLM
KGQGKGLGFSIVGGQDSARGRMGIFVKTIFPNGAAAADGRLKEGDEILEVNGESLQGLTH
QQAIQTFKQLKKGVVTLTVRTRLRSPSLTPCPTPTLLSRSSSPNSNTSGGTPVPPSFEDG
DSRKGPGPKDRIIMEVTLNKEPGVGLGIGACCLTLENSAPGIYIHSLAPGSVAKMDSRLS
RGDQLLEVDSVSLRHAALSEAYAILSECGPGPVSLIISRHPNPKVSEQEMDEVITRSTHR
DSHSSHTLGLPSKSPSPTVKVKQGEGNPALSWTMKRFLEPASRQGSLSSEAELSQYFSVH
DAPSHSSLSETMAMGSSDDDMLHSSRSCNTSMEESAAPRPHVYQDCSYRGSDSSPTTPEC
CKASGGAGRTVDTPQHASVGSSPSSVRSPLLRQRRVICYEDEPSDDETGLEEDSGPFRRH
LRGVSDGVHHHQEEDSGIVIATSSLEVDDESQDSSESHRQIGSEPATPLYGSSLESEEGP
SGLPCAESPFMSIRCMEAAGGTNLGVKKDAHREGQEVKRSPKLEHKAVTRVKSMMSIECP
NPPQRAKGEEPPLLPANAAQVAQNSTRPPCRMLHCKKGESSELAGVCTIETIVLQRNETE
SFGLDLEIKSAPLKVLITGLRPGGVAEREASGKMSVGDEIVTIGDTPVCTSTYQEICDLM
HNLPITLTLEIKKPVSAVDRLSSLIMSSGCEGSSKMETPKPPEERTHMDKTIVAAQESLS
SETNAKQTLDIHSNSIPITNIDDVITELNLAESKEKDKSVLDSTDGSAKTEECSQVDDRT
TAAESQPNLLDFSALDVGNSACHFPVGNTFLNSYSRNFSSLGEDIVPPEKGHGEKPSMYS
LVEDGDSESDSADSAVKVEPSQAHCEGPQDTDSDEEEVELCYSTVSQPSSSQTEGSSLPD
RKSMANCQTVDSLASGAILASMDLHNPLSLTMQDKDSQENHSVSKLPDTLCPKVSGDDLL
NGESGHTPTQYEAMCTSQRTPPNCNTDEKCETISKSVQICQTPTGVPFPTVTQGISHVTP
RSQERTTKLLSDASLSVEKLNTGQVPLESTVSQPKALHGKTSRQASSTIAPKDKEREKVH
PTLDLKSSLSQTQSKSTSSCVKSLGTKSSNDTPISPLLKSRLKVDDKKSNISSKLKGLSI
KSKSIDQEQPVSRTTRVESPGQKKALSSPSQSPKLISKRTTPTGSPKSTRTSEKNRVTSC
KTDQPTVTSVLKTNSINTTKEEFKPSKKEQVSDLKEQVSKSEVTVINTQRTFIEVRLSSS
TSSTPVLTRKEVGNASHLTVASMSVDPVQWEESNSDSSFGRHAVPLESTNSSSISSNHNG
TNKSNGTSCNGQEENLLRNSNNKDDASSLKTSVSKLYLKGLDRRSCSTDTSGSLDPNPFS
VRQRIKSFENLASFDRSVIKFIDIPFYSNNSKPPLNRRLSGYAGSVSSQSSDSRSLRRSF
SSCVDNLSSTPSPPYPQNSSSTSVVTLSESAPQNQTAEAVMKEKVRNEASVNQPALHTPP
VLRSRNARAHGGLSRSKLREIKALSMPELDKLCTEDFTSDPGNVIFKTELEIYPCRSIDT
ASHNLQCTVVTRVSRVDAGVLGSTSNGDQHEGQITGLSCWSISLKDLESSPLDQNKVQDV
LCSLTTKLDVTGLIQETSTLSEVKDDIYFVILTKEQGSGLGFSIAGGVDLEQKSITVHRV
FTRGVAGVEGTIHRGDRVLSINGTSLSGITHAEALSCLHQTRLTKQALVIIQKGKNTEPT
SPRQQLALQTGIGPTPGHRDSIREHKTSVEVGPDGALSVELQKTTAGLGFSLDGGKSSAH
GDRPLYIKRIFRGGAAEQSRVIDVGDELLAINGRSLQGLMHYDAWNIIKTVSEGPVQLVI
RKPRTSV
NT seq
7404 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcacccaagaaaatgccctgagccatctacctctgctggagaactggctttgg
gcacgagaaaaggacagagatgagggcagtgagcctcagatgagcacaggctgtgtttgc
aaggctgccatccgcaagcttgtggaatacatccagctaaattttgctgaattggaaagt
cccctgtacactagcagacaattcagagaggaaatcgatgttgaggtgagagcagtctac
ctgaacaagtctgaggaagatggaccagagtttgggctcagctttggaaatattcccatt
tttggagaccccgaggggaagaagaaaggggtcaggaggaggcgcaggaagagcgataaa
ggccctgtcttggacgtcgggtgcatttgggtgactgaagtgaaaaagaacagcccagcg
gcccgttgtggagaaatcaaactgcgggatgagcttctgtcactaaacggacagttgatg
gttggggtcgatgtcaccggagccagttacttggcggaccagtgctggaatggaggctgc
atctacttgatcatgttgcgaagaattaaacgcaaggctcctctccctccatgcaatggc
agtgggggcaactctgtggacggctctaatgaccaccggcgcaatgtctcttccgagcct
gcaggcagccccacacagaatggacagaacggcaaacgaactcgcaaatttggtgtcatt
tcccgctcctccttcactcgcgacagcaaagacagtaaagatagccaggactttgagcat
gagaacggctacagctccatggaggcagaggtcacgtccccagagagcagcacccctcag
gacacacctaccgatgatagtccagtcattggctcctcagtgctgatgtccagtcacatg
aaggtgggaagcacagccaccctacccagccgctcccactctcgcctgtctgaaagctac
aaaactgagtcaataagcagtgaaccttccagtcagccccgtgagggcagccggatctgg
aagatgcacatggtgaagggtcaggatggactgggtatccagatcacgggagggcgaggg
tccaagcgctctcctcatggtatcattgtggcccacgtggaggagggaggagccacacag
agagacggccgtctgaaagcaggggatgagttactgatgataaacggtcactccctggta
ggactctcacaccaggaggctgtagctgtcctccggtccactgctggactcgtgcagctg
gtcgtggccagcagggatgaatctgaagtggacttccacaagtacccgtccaccagcttg
cccgacctagtgagcacgtgctctggtccggacgcctctccctcccctggggaggagaag
gagaacatggagccggatttggaggacgtgagggccagcagcctttcactgcccacccag
gacttgtttaccgattttgacagactggaggaacgtggcaggtttgagggtcccaaggga
tgttgccgaagccccacaccaatgaagttccgtagcagatctcaaggtggaggaagccgc
ctggagtctgttggtgaagacgatgagcttatcgtggaaaacggtgatgcaggaagtgat
gtggcggaaaagcctgcgcgaggaggacgcaaacattccctcccgcagcagctggataca
gctggcattcgacaggaatatcaaattgtgaagaaatcggctcgttccctgagcactgtt
caagtggaatctccatggcgactggcacagccatccataatctccaacattgtcctgatg
aaaggacagggcaagggtctcggcttcagcattgtcggtgggcaggattcagcccggggg
agaatgggtatattcgtcaagacaattttccccaatggagcagccgccgcagacgggaga
ctgaaggaaggtgatgagatattggaagtgaatggagagtctctccaaggcctcacgcac
cagcaagccattcagaccttcaagcaactgaagaagggagtagttaccctaactgtgcgg
acccgtctgagaagcccaagtcttacaccctgtcccacgcccaccctactcagcagatcc
agctctccaaactcaaataccagcggtgggactccagtccctcctagctttgaagatggg
gactctcgtaaggggcctggtcccaaagatcgcattatcatggaggttacactgaacaaa
gagccaggtgtggggctgggtatcggtgcctgttgtctaacactggaaaacagcgctcct
gggatctacatccacagcttggctccaggatctgttgccaaaatggatagcagactcagt
cgaggagaccagctcctggaggtggactctgtgagcctgagacacgcagcgttgagtgaa
gcctatgctatcctgagtgaatgcggacccggcccagtcagcctcattatcagccgacat
ccaaaccccaaagtgtctgaacaggagatggatgaagtgatcactcgctccacgcacaga
gatagtcattcttcccacacgcttgggttgccgtcgaagagtccatctcctactgttaaa
gtcaagcagggtgagggtaatcctgctctcagctggaccatgaagagattccttgagcca
gccagcaggcaaggctcgttgagttcagaggcagagctctctcagtatttctcggttcat
gatgcacccagccattcttccctttctgagaccatggcgatgggatccagtgatgatgac
atgctgcatagtagcaggagctgtaatacatctatggaggaatcagcagcacctcggcct
catgtctatcaggattgctcctataggggttcagacagtagtcccacaaccccagaatgt
tgtaaagcctctggaggggctggtcgaactgtagacacaccccaacacgccagtgtggga
agcagtccgagttctgtccgcagcccacttcttcgtcagcgtcgggtcatatgctatgag
gatgaacctagtgacgatgaaaccggccttgaagaggacagtggccctttccgtcgccac
ctccgcggggtctctgatggagtccaccaccaccaagaggaagactctggtattgtaata
gccacgtcatctcttgaggtcgacgatgaaagccaggatagcagtgagagccacagacag
atcggcagtgaaccagccactccgctctatggcagctctcttgaatctgaggaaggacct
agtggcttgccttgtgccgaatctcccttcatgtccattcgctgtatggaggcagccgga
ggaacaaacctgggtgtcaaaaaagatgcccatcgagaagggcaggaggttaaacgctca
cccaagctggagcacaaagctgtgactcgtgtcaaaagcatgatgagcattgagtgcccc
aaccctccacaaagagccaagggtgaagaacctcctttactcccagcaaacgctgcccag
gttgcacagaacagcacacggccgccttgcaggatgctgcactgcaagaagggggaatcc
agtgagttagcaggggtttgcactattgagacaatagtgctccagcgtaacgagactgag
tctttcggtctggatctggagattaaatccgctcccctcaaggtgctgatcacagggctg
agaccgggaggtgttgcggaaagggaagcctcagggaagatgagcgttggtgatgagatt
gtaacaattggtgataccccggtgtgtacatccacctatcaggagatctgtgacctcatg
cacaacctgccaatcacattgaccttagagataaagaagccagtctcagctgtagatcga
ctttctagcctgattatgtcttctggctgtgagggctcgtctaaaatggagacacctaaa
cctccagaagaaaggactcatatggacaaaactattgttgcagctcaagaaagcctttca
tcagaaacaaatgcgaaacagacattagatatccacagcaacagcattcccatcactaat
attgacgatgtcataactgaactgaatttagcagaaagcaaagaaaaagacaaaagtgtc
ttggattccacagatggaagtgccaaaacagaagagtgcagtcaagtagacgacagaaca
actgcagcggaatcgcagcctaaccttctggatttttctgccctagatgtggggaacagt
gcttgtcattttcctgtaggaaacacatttttaaatagttactcaaggaactttagtagt
ctgggagaggacattgtccctccagagaaaggacatggagagaaaccaagtatgtacagt
ctggtggaagatggtgactctgagagtgactctgcagacagtgctgtcaaagtagagccg
tctcaagctcactgtgagggtcctcaggacactgactcagatgaggaagaggttgagctc
tgttacagcactgtcagtcagccctcatccagccaaacagagggcagctctctgccagat
agaaaaagcatggccaattgccagactgttgacagtcttgctagtggagccatacttgct
agtatggatctccacaaccctctttcactcacaatgcaagacaaggattcgcaagagaat
cattctgtctctaagttaccagatacactttgccctaaagtttcaggtgatgatctccta
aatggggagagtggacacactcccacacaatatgaggcaatgtgtacatctcagagaaca
ccaccaaactgcaacactgatgaaaaatgtgaaaccatttcaaaatctgttcaaatctgc
cagacaccaacaggtgtcccttttcccactgttactcagggtattagtcacgtcaccccg
agaagtcaagagaggacaactaagttgctctcagatgcatctctgtcagtagagaaactc
aatactgggcaagtgccactggagtcaactgtgtcacagcccaaggcattacatggcaaa
actagtaggcaggcctcctctacaattgctccaaaagataaggagagagagaaagttcat
cctactctagacttgaaatcatcactctcccaaacccagagtaaatccacctcttcttgt
gttaaatctttgggaactaaatcctctaatgacactcctatctcacccctgctgaaaagt
agactcaaagttgatgataaaaagtcaaatatctcttctaaacttaagggtctaagtatt
aagagtaaatccattgaccaagaacagcccgtctctagaacaacaagggtggaaagtcca
ggccagaaaaaagctcttagctccccaagtcagtctcctaaacttatctccaaaagaacc
acaccaactggtagccctaaatccaccaggacatctgagaagaacagggttacttcttgt
aaaactgaccaacccactgtgaccagtgtcttaaagaccaattccatcaacaccaccaaa
gaagaattcaagccttccaagaaggaacaagtctcagacctaaaggagcaagtttcaaaa
tcagaggtcactgttatcaacactcaaagaactttcattgaggtacgactttcatcttct
acatcatctacacctgtgctgacacgcaaggaagttgggaatgcaagtcatttaaccgtg
gcttcgatgtcggttgatccagtccagtgggaggaatcaaattcagactcctcttttgga
agacacgccgtcccattagaatcaaccaattcttcatctatttcttctaaccataacggt
actaataaatcaaatggaacttcttgcaatggccaagaagaaaacctgctcaggaactca
aataataaagatgatgcttctagtctcaaaacaagcgtatcgaaactgtacctaaaggga
ctagaccgcaggagctgctctacagacactagtgggtctcttgacccaaaccccttctca
gttcgtcaaagaatcaagtcctttgagaatctagccagctttgatcgatctgtcataaag
tttatagacataccgttttattctaataactcaaagccacctctgaaccggaggttgtct
gggtatgctggatctgttagcagtcagtccagtgacagccgttctttgaggaggagtttc
agctcttgtgtagacaatttaagctcaaccccatctccaccgtatccacagaattcatct
tccacttcagttgtcaccctctctgaatcagctcctcaaaaccaaaccgcagaagctgtt
atgaaggagaaggtgagaaatgaggcctctgtgaaccagcctgctttacacacaccacca
gtactgcgctcccgtaatgctcgcgcacacggaggcctgtcgcgctccaaactgagagag
ataaaggcactgagcatgcctgaactggacaagttgtgtactgaggatttcaccagtgac
cctggaaatgtgatcttcaagacggagctggaaatctacccttgcaggtccatagacaca
gcatcgcacaacctgcaatgcactgtggtgaccagagtgagcagagttgatgctggggtt
cttggttcaaccagcaatggggatcaacatgaaggccaaatcacagggctctcatgctgg
tctataagtttgaaagatcttgaatcttctcctttggaccaaaataaagtgcaagatgtt
ctgtgttccctcacaaccaaattggatgtgacaggtctcatacaggaaacaagcactctt
tcagaggttaaagatgacatttactttgtgatcttaaccaaagagcaaggatctggactg
ggtttcagcatcgccggaggagtagatctggagcaaaaatctattactgtccatcgggtg
ttcactcgaggggtggcaggcgtggaaggtacaattcacagaggagaccgagttttgtca
ataaacgggaccagcttgagtggtatcacacatgcagaggcactgtcctgccttcatcag
accagactgacgaagcaggcattagtgatcatccagaagggcaagaacactgagccaaca
tcccctagacaacaacttgcccttcagactggaatcggtccaactccaggccatagagac
agcatcagagaacataaaacaagtgtggaagtggggccagacggggctttgagtgtggag
ttacagaagactacagctggtttaggattcagtctagacggaggcaaatcatctgcccat
ggtgatcgacctctatacatcaaacgcattttccgtggaggagccgctgaacagtcccgg
gtcattgatgtcggagatgaacttctagccatcaacggcaggtctttgcagggccttatg
cactacgatgcctggaacatcattaaaacagtctctgagggtcccgtccagttagtcatc
agaaaacccaggacttcagtatga
DBGET
integrated database retrieval system
