KEGG   Carassius gibelio (silver crucian carp): 127957436
Entry
127957436         CDS       T08819                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127957436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    127957436
Spliceosome [BR:cgib03041]
 Complex A
  U2 snRNP components
   U2 related factors
    127957436
 Complex B
    127957436
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 127957436
NCBI-ProteinID: XP_052411930
LinkDB
Position
B5:complement(31614056..31626959)
AA seq 881 aa
MCQKVDMADKKGKSVGVKKTLTKREQEEMKRKEEEKAAEVFEEFIAAFDTNDKSVVKTFV
RGGIVNATKEEEAAEVKKSKLYRPASKFTSPPQNTSPVQPAEGKKTTVKKKVEEKRKKSN
LELFKEELKQIQEEREERYKKKKGDSGGVYPDLDLPLTRRSIFDDDPVVPNTTNLYIGCI
NPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGK
TVMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRNDFTKPHSR
SQEDFYKTLSEAVVTVVIPTERNLLGLIHRMIEFVVREGPMFEAIIMSREKNNPDFRFLF
DNKSQEHVYYRWKLYSILQGENPNKWRTSSFRMFRGGSLWKPPLLNPYLHGDEEPEESSF
PSQEEEPKKGHLKAEHRERLEALLRGLTPRRDEIADAMLFCLERAEAAEEVVSCITEALS
IEHTPLQKKIARLYLISDILYNSCAKVANASYYRKFFETKLPQIFGDISEAYRNIQARLQ
AEQFKQRVMGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPGEEVIDRAEPKSPDLDGVPLD
GIPLERGEIDGAPLDDLDGSPLTWDPSSIDGVPVDDIDGVPLGNQIDDIDGVPFDDGSDK
TLPTVALSKWEKVEDSESSAKNDSDTEVNSSGPKENNGNSDQSSDEADSPSRYEGVEFKS
SLKNFELSESKRTRLRELEVKVMNFQDELESGKRQRKSSMTLQQQVQHYRNRLLQKEFDK
DDQEKTDKYSQKTKDRSKKDERRDKGEERSKARDKEKSRKSEDRERSRGRSRDKEERRER
TRSRSPRKSKRSRSPSPQHKSWRSSSRSPHHSHKKSKKSKH
NT seq 2646 nt   +upstreamnt  +downstreamnt
atgtgtcagaaagttgacatggcagacaaaaaagggaaatctgtgggggtgaagaagacg
ctgacaaaaagagagcaagaggaaatgaagagaaaggaggaagagaaagctgctgaagtc
tttgaggaatttatagctgcttttgacactaatgacaaaagtgtagtgaagacatttgta
cgaggaggcattgtaaatgcaactaaagaggaagaagctgcagaggtgaagaagagcaaa
ctctacagacccgcctctaaattcacttctccacctcagaatacctcacctgttcaacct
gcagaaggcaaaaaaactactgttaaaaagaaagtggaggagaagaggaagaagagtaat
ctggagctctttaaagaggaattaaaacaaatacaggaggaaagagaggagcgatataaa
aagaagaaaggtgactctggaggagtgtacccagatctggatttacctctgactcgacga
tcaatatttgatgatgatcctgtagtaccaaacacaacaaacctgtacatcggctgcatc
aaccccaagatgacagaggagatgctctgtaaggagtttgggaaatacggtcctctggcc
agtgtgaagatcatgtggcctcgcactgaagaagagagaacaagagtcaccaaccgaggt
tttgttgcttttatgacacggaaagatgcagagcgtgctttggccgcactggatggtaaa
acagtaatgggttttgaaatgaagctaggttgggggaaggcagtacgtattcctccacag
cctctgtacacccccatcggggtgctgaagaccactgccccccctccaccatctggactg
ccgttcaacgcccaacccagagaccgctttagaaatgacttcaccaaaccacacagccgc
tcgcaggaagacttctacaagactctgtccgaggccgtagtgacagtggtaatccccaca
gaaaggaacctgctgggcttgatacacagaatgattgagtttgtggtaagagagggaccc
atgtttgaggccatcatcatgagcagagaaaagaacaaccctgacttcaggtttttattt
gataataagagtcaggagcatgtgtactacagatggaaactctactccattctacaggga
gagaacccaaataaatggagaacgtcatctttcagaatgttccggggcggctctctgtgg
aagccacctctgcttaacccgtatctccatggtgatgaggaaccagaagagagctccttc
ccttctcaagaggaagagccaaagaaagggcacctgaaggcagagcacagagagaggttg
gaggccttgctaagagggctgactcctcgcagggatgagatcgctgatgccatgctattc
tgcctggagagagcggaggctgctgaggaggtcgtctcctgcatcactgaagctctgtct
atagaacacacaccactgcagaagaagattgccagactctacctaatatctgacatcctc
tacaactcatgtgccaaagttgcaaatgcgtcatactaccgcaaattttttgagacaaag
ctgccacagatatttggagacatcagtgaagcgtatcggaacatccaggcccggctccag
gcagagcagtttaagcaaagagtcatgggatgttttcgtgcgtgggaagactgggcagtt
tatccagactctttcctgatccaactgcagaatatattcctggggcttattaaacctgga
gaggaagtcattgacagagcagagcccaaatctcctgatttagatggggtgccattggat
ggtattcctctagagagaggggaaattgatggtgcaccccttgatgacctcgatggatca
cctttgacctgggatccatcctctatagatggcgtcccggttgacgatatagacggtgtt
cccctaggaaaccaaatagatgatattgatggtgtgccatttgatgatggctcagataag
actttacctactgttgcactgtctaaatgggagaaggtggaagattccgaatcctcagcc
aagaatgactcggacacagaggtgaactcaagtggcccgaaggaaaacaatggtaactca
gatcagagcagcgatgaggctgacagccccagcaggtatgaaggggtggagtttaagagt
tctctgaaaaactttgaactgtctgaaagcaaaaggacacgcctccgagaacttgaggtg
aaggtgatgaatttccaggatgagttggagtcgggtaagagacagaggaagtccagtatg
actctccaacagcaagttcaacactacagaaacagactgctacagaaggagtttgacaag
gacgaccaggaaaagacagacaaatattcacaaaaaacgaaagaccggtccaaaaaagac
gagaggagagataaaggggaggagaggagtaaagcaagggataaagaaaaaagtagaaag
agtgaggacagagaaaggagtagaggacggagtcgagacaaagaagagaggagagagaga
acaagatcccgatccccacgcaagtcaaaacgctctcgatcaccatcaccacagcacaaa
tcttggaggtcatcgtcccgatcaccacatcactcgcacaaaaagagcaagaagagcaaa
cactga

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