Carassius gibelio (silver crucian carp): 127957492
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Entry
127957492 CDS
T08819
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127957492
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127957492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127957492
NCBI-ProteinID:
XP_052412007
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Position
B5:38238866..38241196
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AA seq
296 aa
AA seq
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MYSMLEHDMKSAVAPAHQSAQGMTQLNGGVTHGAAKSAVNNQQQSSDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDYK
YKPRRKTKPMLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYTGMQTDA
LGYSQQLHRYDLSALQYPSAMATAQTYMNSANSYSPMSYSSTPQQPSPVMSMVKPDQVSH
SPTGAHSHQRGPLQGDLRDMISMYIPGGDTTDSGAQRGYSNIQQHYLTGTAPLTHI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaacacgatatgaaatccgccgtggcaccggcgcaccaaagcgcg
cagggaatgacccagctgaacggtggagtgacgcacggagccgccaaatcggctgtcaac
aaccaacaacagagtagcgatccaatggacaaagttaagaggcccatgaacgcgttcatg
gtctggtctcggggtcagaggcgcaaaatggcacaggagaaccccaaaatgcacaactct
gagattagcaagcgccttggcgcagagtggaagctgctgacggacgcggagaagcgcccg
tttattgacgaggccaagcggctccgcgcactgcacatgaaggaatacccagattacaaa
tacaaaccccgacgcaagacgaaacccatgctgaagaaggataacccggctgctaagtat
cctctatcagccggcaacttactagcggcagccgcggctcagggatcaggtggaagcccg
cggatggacagctatggctggggtcacacaggtggctacactggcatgcagacggatgct
ctgggctacagtcagcagctgcaccgctacgatctgtctgccctccagtatccatctgcc
atggccaccgcacagacttacatgaatagtgccaactcctacagccccatgtcctacagc
agcaccccccagcagcccagcccggtcatgtccatggtgaaaccagaccaggtgtctcac
tctcccaccggagcccacagccaccagcggggtcctttacaaggagacctgagggacatg
attagcatgtatatccctggtggagacaccacagacagtggagcacagaggggctattcc
aacatccaacagcattacctcaccggtacagcacctctcacccacatctga
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