Carassius gibelio (silver crucian carp): 127957526
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Entry
127957526 CDS
T08819
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00061
Fatty acid biosynthesis
cgib00071
Fatty acid degradation
cgib01100
Metabolic pathways
cgib01212
Fatty acid metabolism
cgib03320
PPAR signaling pathway
cgib04146
Peroxisome
cgib04216
Ferroptosis
cgib04920
Adipocytokine signaling pathway
Module
cgib_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127957526
00071 Fatty acid degradation
127957526
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127957526
09143 Cell growth and death
04216 Ferroptosis
127957526
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127957526
03320 PPAR signaling pathway
127957526
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgib01004
]
127957526
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127957526
Enzymes [BR:
cgib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127957526
Lipid biosynthesis proteins [BR:
cgib01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127957526
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of breast milk
127957526
Exosomal proteins of breast cancer cells
127957526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127957526
NCBI-ProteinID:
XP_052412059
LinkDB
All DBs
Position
B5:38602064..38613531
Genome browser
AA seq
671 aa
AA seq
DB search
MLPQCERARSISGRPEGPYRAVECADALITQDFEGVDTLDKLFIHAVKRFSKAPCLGTRE
VLSEEEEKQPNGKIFKKLVLGDYSWITYEEASQAVESFGSGLAALGLQPRNTIAIFCETR
VEWMITAQACFRRNFPLVTLYATLGEDAVAYGLNQCGATHLITSTELLRTKLKNILSAVS
GLQHVIYAGSGEVCHADYPQSLAMHSMQEVTELGAKPENLSKEYEKPTASDLAVVMYTSG
STGRPKGVKMQHSNLIAGMAGQCQRIPGLGSQDTYVAYLPLAHVLELTAEISCVSYGCRL
GYSSPHTLTDQSSKIKIGGKGDCSVLKPTLIAAVPEIMDRICKNVNGKLREMSVVQRTLF
KVGYNYKLQKVSQGADSPVCNMLFFKRVNLLLGGCVRLMLSGGAPLSASTQRFMNVCFCP
VAVGYGLTETCGAGTISEFSDYSTGRVGAPLICSEIKLRDWPEGGYTSQDKPHPRGEILI
GGPNVAMGYFGSEGEGENVNFWVDDAGQRWFCTGDVGEVHPDGCLQIVDRKKDLVKLQAG
EYVSLGKVESALKDSPLIDNICVYASSEKNYLISFVVPNQKQMTELAKKNGIEGEWEELC
KHTKMEEEILKVIKEIAVTSKLERFEVPEKICLSSEAWTPETGLVTDAFKLKRKELKNHY
IKDIERLYGAK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgcagtgtgagagagcaaggagtataagtggacgtccagaaggaccgtatcgg
gcggtagaatgtgcagatgctctcattacacaggactttgaaggcgtggacacgctggac
aaactttttatacatgctgtgaagagatttagtaaggcaccctgtctgggcaccagagag
gtccttagtgaagaagaagaaaaacaacccaatgggaagatctttaagaagttggtcttg
ggggactacagctggattacctatgaagaggccagtcaagcagtggaatcttttggcagt
ggtctggcagctttgggcctgcagccacgtaataccattgccatcttttgtgagacacgg
gtagaatggatgatcacagcacaggcctgcttcagacgcaacttcccattggtaacgctg
tatgcaactctgggtgaagatgctgtagcttatgggctgaatcagtgtggagccactcat
ctcattaccagcacagaactgctgcggaccaaactgaagaacattttgagtgcagtttca
gggttgcagcatgttatctatgcaggcagtggtgaagtatgtcatgctgattacccacag
tctctcgccatgcacagcatgcaggaagtaacggagctcggggcaaagccagagaactta
agcaaagagtatgagaagccgactgcgtctgatctcgcagtggtgatgtacaccagcggg
tctacaggaaggcctaaaggagtgaagatgcaacacagtaatctgattgcaggaatggct
gggcagtgccagcggatcccaggcctggggtcccaggacacttatgtagcttatctccca
ctggctcatgtgctggagctgacggcagaaatatcctgtgtatcatatggctgcaggctc
ggatactcctccccacacacactcacggaccagtccagtaaaataaagatcggtggcaag
ggagattgctctgtgcttaaacccacactgatagcggcagtaccggagatcatggaccgt
atctgcaagaatgttaatgggaagttaagagagatgtcagtggttcagaggactctgttt
aaagtgggatacaactataagctacagaaggtgtcacaaggagccgattctccggtgtgt
aacatgctgtttttcaagcgtgtgaatttgctgctgggagggtgtgtacgtctgatgttg
agcggaggggctccactctctgcttccacacagagatttatgaacgtgtgtttctgccct
gtcgctgtgggttacggacttacagagacgtgtggagcaggaactatctcagaattttct
gattacagtacaggacgagttggagctcctctcatttgctctgaaataaaactgcgagac
tggcctgagggtggatacaccagtcaggacaagccacacccacgaggagagattctgatt
ggtggaccgaatgttgccatgggatactttgggagtgagggggagggagaaaatgtcaac
ttctgggtggatgacgcagggcagcgctggttttgtactggagatgttggggaagttcat
ccagatggttgtttgcagattgtggatcgtaagaaggacctggtgaagctgcaggcaggt
gaatatgtgtctttggggaaggtagaatctgccctgaaagacagccccctcattgataac
atctgtgtctatgccagcagtgaaaagaactacttgatcagctttgtggtgcccaatcag
aagcaaatgactgagctggcaaaaaagaatgggatagagggcgagtgggaggagctttgt
aaacacaccaagatggaggaggaaatactaaaagtcatcaaagagattgcagtaacaagt
aaactggaaaggtttgaggttccagagaagatctgtttaagttctgaggcttggactcca
gaaacagggctggtgacggatgccttcaaactaaagagaaaagagctgaaaaatcattat
ataaaggacattgagaggttatatggggctaaatga
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