Carassius gibelio (silver crucian carp): 127957588
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Entry
127957588 CDS
T08819
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127957588
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127957588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
KH_N4BP1_1st
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_4
TNFR_ELAPOR1_6th
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
127957588
NCBI-ProteinID:
XP_052412161
LinkDB
All DBs
Position
B5:complement(39269249..39286192)
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AA seq
1008 aa
AA seq
DB search
MVLELVAPASAGPALQRCIPHIQRVFRVRVSCSTAESSCESPNAGSCIIVNIEDGKEEDC
TKAKEYIVSLISPVHKHRERLTLWLQRRLHALRAAIEYESCAVVQVRDHALELQGGHAQV
TAACAMLQRLKMEHRGCREPQALPAATGHDSPEEEDEEDDEEAREDGSSSESDGEARSRS
RSSGGVVSTAGSEEGLTGKRQDQLTATKPHRQLCRSSCLDRPSFSQSSILQELRADDTQR
AQMPLRQTSDRDYQTKMDFALKLGYSGEQVESVLSKLGSSALINDVLAELVRLGNKGDPE
SQTAAGTAGLTPRAMGAKETVSHETSLEEDASDTYDNLRPIVIDGSNVAMSHGNKDVFSC
LGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPIKDQEILRKLEKEKILVFTPSRRVQ
GRRVVCYDDRFIVKLACDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPP
DDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGQYSKSKKCTYGHKCKYYHPERANQPLRA
VADELRAFAKLSAVKTMSEGALAKCGISGSANKGDSSSEAKRVAPKRQSDPSIRSVACEQ
EERLCPARKAEANSVPSLVSALSVPTMPLTKSHAAGALNTRSASSPVPGSLHFTHSSLEH
AGSIQYPPILVTNSQGASVAYGEPFPKYDSVVSDHGYYSMLSDFSTISLQDSFCSLEQPE
PVGVGGGYPGRASMCPEPGRSHSSDSYSSYSGEMYLNSLEGSLDDSMKGPPSQTQTQPSA
QTRLQAFAHGFHHEALTRVQSYGTDEPKPGPRKQPSAHLAPHSQHSVIGARSSCPGDYPP
VSQNMLPSASPSQQGRSLGMTRMDSISDSRLYESNPLRQRRPPLCREQHASWDPLPCGNE
PYSYGSYGLTGGLMPCYERVMVRSMPEKMEQIWRSPWDSVPPPPFSARGPAEEPQERHPI
PEHQYQTYRNLCNIFPAYVVHLVMEENPHMTDPQQLAAVIVTKLRTCH
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctcgtcgcgcccgccagtgcaggccctgcgctccagcgctgcatcccg
cacatccagcgggttttccgggtcagagtgagctgcagcaccgccgagtccagctgcgag
agccccaacgccggctcctgtatcatcgtaaacatcgaggacggcaaggaagaagactgc
actaaagctaaagagtacattgtgtcactgatcagtccagtgcataagcaccgtgagcgt
ttgactctttggctgcagcggcgactgcatgccctgcgtgcagctattgagtacgagagc
tgtgccgtggtgcaggtgagggaccatgcactggagcttcagggaggtcatgcacaggta
acagctgcatgcgccatgctgcagcgcctgaagatggagcaccgcggctgccgagaaccc
caggccttgcccgctgccaccggccatgactctccagaagaagaggatgaggaggatgat
gaagaagccagggaagatgggagcagttctgagagtgatggtgaggcacggtcacggagc
aggagttctggaggcgttgtcagcacggcggggtcagaagaaggattgaccggaaagagg
caggaccaactcacagcaaccaaacctcaccggcagctgtgtcgctcatcctgtttggac
cgtcccagcttcagccagagcagcatcttacaggagttgcgcgcagatgacacccagaga
gcccaaatgcccttgcgtcaaaccagcgatcgagattaccaaaccaaaatggactttgct
ctaaaactgggctactccggagagcaggtggagtctgtgctgagtaaactggggtccagt
gcactaatcaatgatgtattggccgagctggtacgcttagggaataaaggagatccagag
agccagacagcagcgggcactgcaggtttaacaccacgggcgatgggtgccaaagaaacc
gtcagccatgaaacatcgctggaggaagacgcatcagacacgtatgacaacctcagacca
attgtgattgatggatccaatgttgccatgagccatggaaacaaagatgtgttctcatgc
ctgggcattcagctggctgttgattggttcctggagaaaggccacaaagacatcacagtt
ttcgtcccagcatggaggaaagagcagtcaagacctgatgcgccaatcaaagatcaggag
atcctacggaaattagagaaggaaaagatcctcgtcttcacgccgtctcgcagagtccaa
ggacgacgagtggtttgctacgacgaccgttttatcgtcaagctggcctgcgactcagac
gggatcatcgtgtccaacgacaactaccgagacttgcagaatgagaaaccagagtggaag
aaatttattgaggaacgactcctcatgtacagcttcgtcaacgacaagtttatgcctcct
gatgatcctttaggcagacatggacctagtcttgaaaattttctccgcaaacgaccagtg
gttccagagcacaagaagcagccgtgtccttatggtcagtacagcaaaagtaagaagtgc
acgtacggccataaatgcaagtactaccacccagaaagagccaaccaaccactgcgggct
gttgctgacgagctcagagcctttgccaaactctccgctgtaaaaacaatgagtgagggg
gcacttgccaaatgtgggatctctggttctgctaacaagggggacagtagctccgaggca
aagcgagtggcacccaagcgccagtctgaccctagtatccggtcggttgcatgtgagcaa
gaagagagactctgtccagcgcggaaggcagaggccaattctgtaccatcgttagtttcg
gcacttagcgttccaactatgccactgacgaaaagtcatgcggcaggcgccctgaacaca
cgctcggcgagcagccctgttccagggtctctgcactttacccacagctcgctcgagcat
gcgggcagcattcaatatccccccatcctagtcaccaatagtcagggcgcctccgtggct
tatggtgagccgttccccaagtacgactctgtggtaagcgaccatggctactattccatg
ctcagtgacttctccaccatcagcctccaagacagtttctgcagtcttgaacagccagag
cctgtaggggtgggtggaggatatcctggtagagccagcatgtgccctgagcccggccga
agtcattcgtcagactcctattcgtcctacagtggagagatgtacctcaactcattggag
ggcagcctggatgacagcatgaaagggccaccgtctcagacccagactcaaccttcggcg
caaacacgccttcaagcctttgcacacggtttccaccatgaggccttgactcgtgtgcag
agctacggaacagatgaacccaaaccgggacctcgaaagcagccctccgcccaccttgca
ccacactcccaacactcggtcattggtgcccgatccagctgcccaggagactaccctcct
gtgtcccagaacatgttgccttccgccagcccttcccagcagggtcggtccttaggcatg
actcgaatggacagcatatctgactcacggctctacgagagcaatccgctgcgccagcgg
agacctcctctttgtcgagagcagcatgccagctgggaccctttgccgtgtggtaacgag
ccctacagttacggaagctacggattaacgggaggcctcatgccttgctatgaaagggtg
atggtccgcagcatgcccgagaagatggagcagatttggaggtccccgtgggatagtgtg
ccgcctccaccgttcagtgctcgtgggccagcggaggaaccccaagagcggcaccctatt
ccagaacaccagtatcaaacctaccgaaacctctgtaacatcttcccggcatatgtggtc
catttggtcatggaggagaaccctcacatgaccgatccccagcagctggctgccgtcatc
gtcactaaactgcgcacttgccactaa
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