Carassius gibelio (silver crucian carp): 127957661
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Entry
127957661 CDS
T08819
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127957661
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127957661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
127957661
NCBI-ProteinID:
XP_052412243
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All DBs
Position
B5:29857911..29874246
Genome browser
AA seq
1070 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDVKMATGNYFGFTHGAAAAQYSQQPAPGVAYTHPTTVASYT
VHQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAANAGAYGGYQPAHAAADYGYAQRPP
EVPPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPAATPAVAAAAAQPQPTVAESY
YQTAPKTGYSQGATPYTQTQQTRQVTAIKPATPRPATSTFSIYPVSSAVQPVAAAAASVV
PSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQKQAAVAAAATAAWTGS
TFTKKAPLQNKTLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKLSQ
SSSSSSGGGSSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPST
EPSVVSQSSTSSTAAPNKTASSNISSSTSTSSSLSVSASYLKSGNMVNNMAASAAQGKSP
VPNSTSVKKVNTPKINFVGGNKLQTTAVKNDESKIEAAKTAQSALSAQPMDLKNEMPDPL
SPQSALEALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRL
QYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYW
RRMEEEQHHWDERRRMPDGSYPQGPPGPPGLLGVRPGMPIPQPQGPVPPRRPDSSDDRYV
MTKHAAIYPSEDELQAIQKIVSITERALKLVSDIITDQDASAKGKEEDKEKKEPPQDRVL
KGVMRVGVLAKGLLLSGDKNVNLVLLCSEKPTKNLLTRIVEHLPKQLTMVTPEKYEVKGS
VQEAAIILTSSADPKMQVTITLTSPVIREENTRDGDVTSSMVKDPADVLDRQKCLDALAA
LRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPSWAMELLVEKAISSASGPMSPG
DALRRVFECISSGILLSGAPGLIDPCEKNPTDTLATMEEQQREDITSSAQFALRLLAFRQ
IHKVLGMDPLPQMNSRFSVRNNRKRRRDNSDGTDGFEAEGKKDKKDYEGF
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtctccttcacctatgtgcccagccggctaggtgaagat
gtcaaaatggccaccggcaactactttggatttacccatggtgctgccgcggcccagtac
agtcagcagccggcccctggggtagcatacacccaccccactacagtggccagctatact
gtgcaccaagcacctgtggcggcacacacggtggcagcagcctacgcccctacagccgcc
acggttgctgttgctaggcctgccccggtggcagtagcagcagcggctaatgctggcgct
tatggaggataccagccagcccacgctgccgcagattatgggtacgcacagagaccgccg
gaggtacccccaccaccgcctcctgttacctcgcaaaactaccaggactcctattcatat
gtgcggtccacagctccggctgtagcctacgacagtaaacaatactaccagcaacctgca
gctacaccagctgtagccgctgcagcagcccagccacaacccactgtggccgaatcctac
tatcagacagcccctaaaactggatacagccaaggcgccactccgtacacccagacccag
caaacacgtcaggttacagccataaagccagccacccctagacctgccacctcaaccttc
tccatttacccagtgtcctctgctgtacagccggtcgcagctgcggccgcctctgtagtc
ccgtcatactcccagagtcccacctacagcaccaatgcagtcacatactctggaacgtca
tactctggctatgaagctgcagtgtattcagctgcctcttcctactatcagcagcagcag
caacagcagcagaaacaggcggccgtcgccgcagcagccactgccgcgtggacaggcagc
acttttacaaagaaagctcctttgcagaacaaaacactcaaacctaaacagccccctaaa
ccaccacagatacactactgtgatgtctgcaagatcagctgtgctggaccccagacctat
aaggagcatctggagggtcagaagcacaaaaagaaggaagctgcattgaagctgtcacag
agcagcagtagcagcagcggaggcgggagctctgcccgcggcacacagaatcagctacgc
tgtgaactctgtgacgtctcctgtactggagctgatgcctacgccgcgcacatcagagga
gccaaacaccagaaggttgtgaaattgcataccaaactaggaaagccaataccatccaca
gagcccagtgttgtttcccaatcctccacctccagtacagctgctcctaataaaactgcc
agctccaacatcagcagctccacaagcacatcatccagtctctctgtttctgcctcttac
ttaaaatctggcaatatggtcaacaacatggcagcttcagctgcacagggcaagagccca
gtgcccaacagcacctctgtcaagaaggtcaacacacccaagatcaactttgttggtgga
aacaagttacagaccactgcagttaaaaatgatgaatccaagatcgaggcagctaaaacg
gcacagtccgccttgtcggcacaaccaatggacctaaagaatgaaatgcctgaccccctg
tcacctcaatcagcacttgaagccctgcagagtgatgttcagcccgtcggacatgactat
gtcgaagaggtaaggaatgatgaaggaaaggttatccggttccactgcaaactgtgtgaa
tgcagtttcaatgacccgaatgccaaagaaatgcatttgaaaggaaggagacatcgacta
cagtataagaaaaaggtgaacccagatctccaggtggaagtgaaacctagcatccgagcc
aggaaaatccaagaggaaaagatgaggaagcagatgcaaaaggaagagtactggagaaga
cgtgaagaggaggagcgctggaggatggagatgaggcgctatgaagaggacatgtattgg
cgacgcatggaggaagagcagcaccactgggacgaaaggcgcagaatgcctgatggaagt
tatccacaaggtccacctgggcctcctggtcttcttggagtgaggcctgggatgcccatt
cctcaaccacaaggaccagtgcctccacgtcgccctgattcctcagatgatcgctatgtg
atgaccaaacatgcagctatttacccatctgaagatgagctccaggccatccagaagatc
gtatcaatcactgaacgagctcttaagctagtctctgacatcatcacagaccaggatgcg
agtgcaaagggcaaagaagaggacaaagaaaagaaagagcctccccaagatagagtgctg
aagggagtgatgcgggtaggcgttctagccaaaggtctgcttctaagtggagacaaaaat
gtcaatctggtcctcctctgttccgagaagccgaccaagaatcttctaacacgcattgtg
gaacatcttcccaaacagctcacgatggtaactccggagaaatatgaggtaaaaggttcc
gtccaagaggctgccattatccttacctcctctgctgaccccaagatgcaggtgaccatc
accctcacctcgcctgtcatccgagaggaaaacacccgggatggagatgtaacctcgagt
atggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggctgcc
ctacgccacgctaagtggttccaggctagggctaatggactccagtcatgtgtgattgtc
attcgaatactgcgtgacctttgtcagcgagtaccaacctggtctgcctttcctagctgg
gctatggagctgctggtggagaaggctatcagcagtgcctctggaccaatgagccctgga
gatgctcttcgaagagtctttgaatgtatttcctcaggcattctgctgtctggtgcgcca
ggattgatagacccctgtgagaagaatccaacagatacactggctaccatggaagagcag
cagagagaggacattacgtcaagtgctcagtttgccttgaggctgctggcgttccgtcag
attcacaaggttctgggtatggaccccttgccccagatgaactcacgtttcagcgtacgg
aataaccgcaagaggcgacgtgacaacagcgatgggaccgatggatttgaagctgaaggg
aagaaagacaagaaggactacgaggggttctga
DBGET
integrated database retrieval system