Carassius gibelio (silver crucian carp): 127957695
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Entry
127957695 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127957695
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127957695
04082 Neuroactive ligand signaling
127957695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127957695
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
127957695
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
SIP
Peripla_BP_6
DUF6724
DUF3663
Motif
Other DBs
NCBI-GeneID:
127957695
NCBI-ProteinID:
XP_052412289
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Position
B5:35692636..35721074
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AA seq
937 aa
AA seq
DB search
MRLVLFAFLISCSCARGGCEPKTVNIGAVLSQKRYEQVFKDAVTQANNIYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNTQRKIIWPGGETEKPKGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEHTVNGVLIKKVICTGPNETIPGRPTVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TNLASNIKRRRSSKDTPYPTDITGQLNLSDPSVSTVV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctgttcgccttcctcatctcgtgctcctgtgcgagaggcggatgcgaa
cccaagactgtgaatatcggagctgtcctgagccagaagagatatgaacaagtgttcaaa
gacgctgtcacccaagccaacaatatatacggcaaagataagttcaagatgaacgctatt
tctgtcacccataaaccaaacgcaatccagatggcactctccgtgtgtgaggatctcatc
tctaaccaggtgtatgcgatcttggtgagccacccaccccagtccaacgaccatcttact
ccaactccggtgtcctacacagctggtttttaccgtatccctgtagtgggcctcaccacc
cgcatgtccatctactctgataagagcatccacctctcctttctgcgcacggtgccaccc
tattcccaccaagctcaagtgtggtttgacatgatgcgtgagttccagtggaatcacatt
atcctgattgtgagtgatgaccacgagggcagagcggcacagaaaagactggaaaccctg
ctggaggaaagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacccaaggcagagaaagtgctcctgttcagccaagacacaaat
ctgacggctctgctccaggaagccaaagagctagaggcccgagttatcatcctgtctgca
agtgaagatgaagctgcagccatttacaaagcagcgcgccagctcaatatgacaggctct
ggttatgtttggctggttggagaaagggagatgtctggtaaagcactgagtgaagcccca
gatggcttgctcggccttcagcttatcaatggcaagaacgagtctgcgcacatctacgat
gccgtggctgtggtggcccagtccattcaggagctctttgagaaggagaatatcacagag
cctccgcgaggctgtgttggcaatacaaacatctggaagactggcccactcttcaaacga
gtgctgatgtcatccaagtatccagatggcctgacaggccgcgtggagtttaatgatgac
ggagacaggaggttcgcccactacagcattctgaactaccagaaaacccggctggtgcaa
gtgggcgtctacaatggctcgcaagttgtaatgaacactcagaggaagattatttggcca
ggaggagagactgaaaagcccaaagggtatcagatgtcaacaagattaaagattgtcacc
attcatcaagagccctttgtctatgtgaaaccaacgttacgagatggaacatgtaaggaa
gagcacactgtaaatggagtcctgatcaaaaaagtgatctgcactggccccaatgagacc
attccaggtcgccccacagtgcctcagtgctgctatgggttctgcattgaccttttgatc
aaacttgcaatgacaatgaacttcacttatgaagtgcatttagttgctgatggcaaattt
ggcactcaggagcgtgtaaataacagcaacaagaaggagtggaatggcatgatgggagag
ctcctgagtggcttggcagacatgatcgtggctccacttacaatcaacaatgaacgagcc
cagtatatagagttctcaaaaccgttcaagtaccaggggctcacaatacttgtcaaaaag
gaaataccacgcagtacactggactcgttcatgcagccttttcagagcactctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccgtttggaaggtttaaagtaaatagtgaagaggaagaagaagatgccctcaccttatcc
tctgctatgtggttctcctggggtgtacttctgaactccggcattggagaaggtgcccct
cggagcttttcagcaaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcatcgtatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagacaagttcatctacgccacagtg
aagcagagctcagtggacatttacttccggcgccaagttgagctaagcaccatgtaccgc
cacatggaaaagcacaactatgagagcgccgctgaagccatccaggccgtgcgagacaac
aaactccacgcttttatatgggattcagcagtgttggagtttgaggcctcgcagaaatgt
gacctggtcaccacaggcgagctgttcttccgctctggattcggtattgggatgcgtaaa
gatagcccgtggaagcaaaatgtctcactggccatcctcagttcccatgagaatggcttc
atggaggacttggataaaacctgggtccgttatcaagagtgtgactccagaagcaatgca
ccagccacgctcactttcgagaatatggcaggcgtgtttatgttggtggctggtggcatc
gtcgccgggatcttcctcatcttcattgagattgcgtacaaacgacacaaggatgcacgc
aggaagcaaatgcagctggcttttgcagcagttaacgtatggaggaagaacttacaggat
aggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatcagt
accaacctggcctccaacatcaagagacgtaggtcgtccaaagacacgccatatcctacg
gacattaccggccagctcaacctgtcagacccctctgtgagcacagtggtgtga
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