KEGG   Carassius gibelio (silver crucian carp): 127957707
Entry
127957707         CDS       T08819                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03030  DNA replication
cgib03410  Base excision repair
cgib03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127957707
   03410 Base excision repair
    127957707
   03420 Nucleotide excision repair
    127957707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgib03032]
    127957707
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127957707
Enzymes [BR:cgib01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     127957707
DNA replication proteins [BR:cgib03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    127957707
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      127957707
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 Sigma70_ner GIS4
Other DBs
NCBI-GeneID: 127957707
NCBI-ProteinID: XP_052412304
LinkDB
Position
B5
AA seq 2286 aa
MVLQNSGRFKADRGGGDQDNQQDDASAMSAVKRLERSQFTDEMDERFGFERMKEPGEKTG
WLINMHPTEILDDDKRMISAVDYYFIQEDGNRFKIALPYKPYFYIATKKNCEREVISFLS
KKFQGKVAKLEVVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLIKVKREISPAVRKNRERE
KSNDAYTSMLSSALVGGSVVTEDEDGTSKKMTEQLDNIVDMREYDVPYHVRVSIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEASLIQRWFEHIHETKPNIFV
TYNGDFFDWPFIETRAAQLGLSMYREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHVNIVFPNKQEQVFNKLTDDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLIQRVEHTLRHAIEEEEKVPLEQVTNFNEVC
EEIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHVLNREEQARHEK
KRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
TAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKAKVTISYPGAMLNIM
VKEGFTNHQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAIPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQTL
PAGETPDMEDFGAPQRPVQPAILISTKRKRISQGEDSQAESQEQELTQSWREILGPPPTI
GANREELLVWLRYHKKKWELQLRQRKERRKRRRLVDGESQPTGGGVIRGGPTTGLGSFLR
RTARSILDMPWQIVQIAETSHPGFYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEEGAN
CKKVNRILPRSGVVYYLYQYAVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCMCMVNKQVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALF
GLFIPSQRKASIFVLDTVRSNQMPNLSSLYGAERTALLEKTTEELLPPEKHMFEVRAEND
VKAIYRALQRILLNYKEERRGPTLVAVQSNWELRRLMAGMTVLEEFPVVPVHVIDEISYN
VLDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPQDISIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDERGSMEINSHGCYSTVCVELDIQSLAVNTIL
QSQHVNDMEGGASIGVSFDVIQHASLEEMMSGNQGANTVASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLG
SSVIYGNFNRLILCTKKRRIDDAIAYVEYITNSIHSKEIFHSLSITFSRCWEFLLWMDPT
NYGGVKGKLPSSLLYGEDGNEKKKKKDVEEEDGSEEEEEDEENQGEDEEQDGEDDVEDLI
ESNWNIMQYLPQTASCQKYFLVIISAYIAAVYHSMKQELRRNAPGATPIKRRGATQASQQ
PTGDVSALPGLITFSQEYVSSELTQNFFTITQKIQKKVSSTRSVTLPSEMFPVLPGSHLP
LNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEDAQFRDPCKSYILPEV
ICHQCNFCRDLDLCKDPAVSQDGSVLPQWFCSNCQAQYDTESIEMALVEALQKKLMSYTL
QDLECSKCKGVKEANMPLYCSCAGDFNLSFTTKSFTEQVEVFRNIAAHYNMNFLLETIDW
VLSMNA
NT seq 6861 nt   +upstreamnt  +downstreamnt
atggttttacaaaacagtgggcgatttaaagcagaccgaggtggtggagatcaggacaac
cagcaggatgatgcatcagctatgtccgccgtcaagcggctggagcgcagtcagttcact
gatgagatggacgagcgctttggcttcgaacggatgaaggaacctggggagaaaactggc
tggctgatcaacatgcatccgactgagattctggatgatgacaagcggatgatcagtgct
gtggactattacttcatacaggaggatggaaacagattcaagattgctcttccatataag
ccatatttctacatagccactaaaaagaactgtgaaagagaggtcatctccttcctgtcc
aagaagttccagggaaaagtggctaagcttgaagttgtcccaaaggaagacttagatctg
cctaatcacctggtgggcctgaagaggaattacatcaaactctcttttaacacggttgat
gaccttattaaagtgaaaagggagatctcacctgctgtccgcaagaacagagagagagag
aagtccaatgatgcctataccagcatgttatccagtgctttggttggtgggagcgtagtg
actgaggacgaggatggcacttcaaagaaaatgactgagcagcttgacaacatcgtagac
atgagggaatatgacgttccttatcatgtccgcgtttctattgacctgaagattcatgtg
gctcactggtacaatgtgaggtacagaggaagcgcctatcctcctgagattgtgcgcagg
gatgatcttgtggaaagacctgatcctgtagtgttggcttttgatattgagaccacaaaa
ctcccactgaagtttcctgatgctgaaacagaccagattatgatgatatcatacatgata
gatgggcagggcttcctcatcacaaacagagagatagtctctgaagacattgaggacttt
gagttcaccccaaaacctgaatatgagggtcccttcactgtattcaatgaacctgatgag
gcctctcttattcagagatggtttgaacacatccatgagaccaagccaaacatttttgtc
acttacaatggagatttctttgactggccatttatagaaaccagagcagcccagcttggc
ttgagtatgtatcgggagatcggcttccagaaggacaatcagggggaatataaagccagc
caggctattcacatggactgcctcaggtgggtgaagcgagacagttacctgcctgtagga
agtcataacctcaaggctgcagcgaaagccaagttaggctatgaccctgtagagctggac
ccagaggagatgtgccgtatggctactgaagaaccacagactctggccacctattcagtg
tctgacgctgtggccacatactacctttacatgaaatatgttcatcccttcatttttgcc
ctctgcactataattcctatggaacccgatgaggttttgcggaaaggctccggtaccctg
tgcgaggccttgctgatggttcaggccttccatgtcaacattgtcttcccaaacaagcag
gagcaggtctttaacaaactcacagatgatggtcatgtacttgactctgagacttatgta
ggtggccacgtcgaggctctagagtctggtgtgtttcgtagtgatataccctgccgcttt
aaaatgaatccagcagcatttgacttcttgattcagagggtggagcatactctccgtcat
gcaattgaggaagaggagaaggttccccttgagcaggtcaccaactttaatgaggtgtgt
gaggaaatcaagaggaagcttatctctctaaaggaagtgcccaatagaatcgagtgtcct
cttatttaccatctggatgtaggggccatgtaccccaacatcattctcaccaacagacta
cagccctctgccatggtggatgaggcgacctgtgccgcctgtgattttaataaacctggt
gcaaactgtcagcgcaagatgacttggcagtggagaggagagatcatgcctgcaagtaga
agtgagtttcatcgcattcagcaacaactggagtctgagaagtttccccctctctttcct
aatggtccaccacgtgctttccatgtgctcaacagagaagaacaagctcggcatgagaag
aagcggttgggagactactgtcgaaaagcctataagaaggttcacctgaccagactggag
gagagagtcactaccatttgccaaagagagaactctttttatgttgacacggttcgagcc
ttcagagaccgtcgatatgagttcaaaggactccacaaggtgtggaagaagaagctgtct
acagcacaggataatggggacgcagcggaggtgaagcgctgcaagaacatggagattctc
tatgagtctctgcaactggcacacaagtgtatcctcaactccttctacggatacgtcatg
agaaaaggagcacgttggtactcgatggagatggcagggattgtctgtttcaccggtgcc
aacattatcacacaggccagagaactcattgagcagattgggaggcctctggagttggac
actgatggtatctggtgtgttcttcccaacacctttcctgaaaactttgtcataaaatcc
accaatgagaagaaggcaaaggtgaccatcagttatccaggagccatgctgaacatcatg
gtcaaggaaggcttcacaaatcatcagtatcaagagctggtggacccagcatctttaaca
tatgagaccagagctgagaacagtatcttctttgaagttgatgggccgtacttggctatg
attcttcctgcctctaaagaagaagggaaaaagctaaagaaaaggtatgccgtgtttaac
gaggacgggtcgctggctgagctgaagggctttgaggtgaagagaagaggagaacttcaa
ctcattaagatcttccagtcatctgtgtttgaggccttcctgaaaggcacaactctagaa
gaggtttatgcttctgtggctaaagtggctgactactggcttgatgtgctctacagcaag
gctgctaacatgccagatgcagagttgtttgagctgatttccgaaaatcgctccatgtcc
cgtaagctggaagattatggcgaacagaagtccacctccatcagcacagccaagcgtctt
gctgagttccttggtgatcagatggtgaaggacgctggtctcagctgtcgctatgtcatc
tcccgcaaaccggagggttcgcctgtcactgaaagggcgatccctctggccatttttcaa
gctgaagagagtgttaaaaagcatttcctacgcaaatggctgaagatgcccagtctccat
gaccttgatatcagatctattctggactggagttactacattgagcggttgggcagtgcc
attcagaagatcatcactattcctgcagctctacaacaggtgaaaaatccagtaccccga
gtacggcatccagattggcttcataagaagcttctggaaaagaatgacatctacaagcag
aagaagatcagtgagctctttaccagtgagggaaagagacaggtggcccatcaaacgtta
ccagcaggtgagactcctgatatggaggacttcggtgctcctcagcgccctgtgcagccc
gccattctcatcagcacaaagaggaagaggatatctcaaggagaggacagccaggctgaa
tctcaagagcaagaactcacacagtcttggagagaaatactggggccaccaccaactatc
ggcgccaaccgggaggaacttcttgtctggttgcgctaccataagaaaaaatgggagctg
cagcttcgtcagaggaaagaacggcggaagaggcggcgtttagttgatggtgaatctcag
ccaactggtggtggcgtaatccgtggtggaccgacaacagggctaggcagctttttgcga
agaactgcccgcagtattctagacatgccctggcaaattgtgcagattgctgaaaccagt
cacccaggcttttataagctgtgggcggtcattggcagtgacctgcactgcatgaagctc
aacatcccacgagtgttttatgtcaaccagaaagtgcccaaacaagaagagggagctaat
tgcaaaaaggtgaaccggatacttccacgctctggtgtggtgtattatctgtaccagtat
gctgttcctgaggatatgtaccaggaacacatcaatgagatcaatgctgacctctcagct
cctgatattgagggtgtctatgagacacaggttccactgctgttccgggctctggtccag
ttgggctgcatgtgtatggtcaataaacaggtggtcagagacctggctggcagagaggct
gataccttcgacctggagcacctagagatgagatccctggcccagttcagctacctcgag
ccaggcagtgtaaggcacatctatctgtaccatcacagtcagggccacaaggctctcttt
ggcctcttcataccatcccaacgcaaagccagcatctttgttcttgacacggtacgcagt
aatcagatgccgaaccttagctctttgtacggagcagagcgcacagcactcctggagaag
accacagaggagctgctgccacctgagaaacatatgtttgaagtgcgtgctgaaaacgac
gtcaaagccatctaccgcgcactgcagcgcattctcctcaactacaaggaggagcggcgt
ggtccgaccctggttgctgttcagtctaactgggagctgcggcggctgatggctggcatg
actgtactggaggagttcccggtggtcccggttcatgttattgatgagataagttacaat
gtactggactggcagcggcacggagctcgccgcatgataaaacactacctgaacctggac
agctgcctctcacaggcttttgatatggccaggtattatcacctgcctgtgggaaatctg
ccacaggacatttctatatttggatcagatctgtttcttgcacgtcatctgagaaagcac
aaccacttgttgtggctgtcacctacggcacgtccagacctcggggggaaagaggctgac
gacagcaggctggtgatggagagtgatgagagaggttccatggagatcaatagccatggc
tgctactcaacagtttgtgtggagttggatattcagagtttggcagtaaacaccattctg
cagtcccagcatgttaacgacatggaaggcggggccagcattggcgtcagctttgatgtc
attcagcatgcatctctggaggaaatgatgtcagggaatcagggagcaaacacagtggcc
agctatgacgagacggcgctctgctccaatacattcaggattctgaagagtatggtggtc
ggttgggtcagagagatcacgcagtatcataacgtctacgctgataaccaggtgatgcat
ttttaccggtggttacgatcacccagttctctgctgtacgacccggccctgcatcgcaca
ctcctcaacatgatgaagaagatcttcctgcaacttgtggcagagtttaagcgcctgggc
tcatctgtgatctatggaaacttcaaccgtctcatcctctgcactaagaaacggcgcatt
gacgacgccattgcatacgtggagtacatcactaacagtatccattcaaaggagatcttc
cactctctgtctatcacattctcacgctgttgggagtttctgctgtggatggatccaact
aactatggaggagtgaagggaaagctgccctctagccttctttatggagaggatggcaat
gaaaagaagaaaaagaaggatgtagaggaggaggatggaagtgaggaagaggaagaagat
gaagaaaaccaaggggaggatgaagaacaggatggggaagatgatgtagaagacttgatt
gaaagtaactggaacatcatgcagtaccttcctcagacagcatcctgtcagaaatacttt
ctcgtgatcatttcagcctacattgcagcggtctatcacagcatgaaacaagagcttcgg
cgaaacgctcctggtgctactcccattaagagacgaggagcgacccaagcatcccagcag
ccaactggggacgtcagtgcacttcctggtttgattacattctctcaggagtatgtgtct
agtgaactcacacagaacttcttcaccatcactcagaagattcagaagaaagtgtcaagc
actcgcagtgttacgctcccatctgagatgtttcctgttcttcctggttctcacttgccc
ctcaacaacccagctctggagtttattaaatatgtctgccaggtgctctctctggatgcc
aacattgtcaatcaggtgaacaaactgaagcgagatcttttgcgactggtggatgttgga
gaattttcggaggatgcccagttccgtgacccctgcaagtcctacatcctgccagaggtt
atctgccaccagtgtaacttctgtcgtgacctcgacctctgcaaagaccctgcagtttcc
caggatggttcagttcttcctcagtggttctgctctaactgtcaggcccagtacgacaca
gagtccatagaaatggccctggtggaggcgctccagaagaagctcatgagttacacacta
caagacctggaatgttccaaatgcaaaggtgtgaaggaagcaaacatgccgctgtactgt
agctgtgctggagatttcaacctcagctttaccacaaagagcttcactgagcaggtggag
gtgttccggaacattgccgcccactataacatgaacttcctgttagagaccattgactgg
gtgcttagtatgaatgcgtag

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