Carassius gibelio (silver crucian carp): 127957717
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Entry
127957717 CDS
T08819
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127957717
03036 Chromosome and associated proteins [BR:
cgib03036
]
127957717
Spliceosome [BR:
cgib03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127957717
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
127957717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RRM_occluded
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
127957717
NCBI-ProteinID:
XP_052412322
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All DBs
Position
B5:complement(39946711..39963386)
Genome browser
AA seq
955 aa
AA seq
DB search
MATTGNEEQTLLPGIEEEAEGMEREMESEEEEEEEEGMGVEQSEEEDEEDTSEDERENEA
EIQRLEEQLSINAFDYNCHVDLIKLLRQEGKLHRLRKARQKMSELFPLTEEIWLDWLKDE
IRVTEDESDREKVYELFERAVKDYMCPEIWLEYVQYSIGGMGAQGGIERVRSIFERALTA
VGLHMTKGASIWEAYREFEIVILSTVQPPPGSVASKEQQELLNAQLERIHKLFRRQLAVP
LMDMEGTYAEYSDWADDGVPETVTHQYRHSLQQLEKCKPFEEALLVSEPPKLAEYQAYID
FEIKEGDPARVQIIFERALAENCLVPDLWIKYTSYLDRQLKIKDLVLSAHERAVRNCPWT
MSLWKSYLLALERHGADHQTVTDVFEKALNAGFIQAADYVEIWQSNLDYLRRRVDFSKEW
SRELDELRAAFARSLDYLKQDVKERFSESGDLSCIIMQIWARIEALHCKNMQKARELWDS
IMTKGNAKYANMWLEYYNLERSYGDAAHCRKALHRAVQCTSDYPEHVCDVLLNFERVEGS
LEDWDAAVQKTETKLNRVNEQRARVAEKEAVLARQEEEKAEHRRKAKADKKAQKKSQKAN
STGDKRKAEDEDEDEWGEDEELPSKRLRGEEDFGSTATEEHMETESGLFSRRAPPPRKSE
PPSFHKNQQGLSEAPRQPQEQRRDEDCVFVSNLAFNLEDPEGKMRTLFQGCGTVQQVRPV
FTPKGVFRGYCYVQFEDRVAVSEALKLDRQEVDGRPMYVSPCVDKNKNPDFKVFKYKTAM
EKHKIFISGLPYSCTKETLEDLCKQHGTVKTIRLVTNRSGKPKGLAYVEYENEAQASQAV
MKMDGTMLENFTISVAISNPPSRKMEDKAAPSRILGASTLRQPQGARGKGRTQISLLPRS
LYRQSAPDAKAENGTVSAPHATVTDGVHEGPGTTSLDTQTKPLSNEDFARMLLKK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacgggtaacgaagagcagacgttgttgccaggtatcgaagaggaggctgag
ggcatggagcgagagatggagtcagaggaggaggaggaagaagaagaagggatgggagtt
gagcaatccgaggaggaagatgaagaagacacgtctgaagacgagcgcgaaaatgaagcg
gagatccagaggctggaggaacagctgtcaatcaatgcatttgactacaactgccatgta
gacctaatcaaactcctgcggcaagaagggaagcttcacagactgcgcaaggccaggcag
aagatgagtgaactatttcctctcaccgaagagatttggctggactggctgaaggatgaa
atccgtgtgacagaagacgaatcagaccgtgagaaagtctacgagctgtttgagagggct
gtcaaagattatatgtgtccagagatctggttggaatatgtacagtactccatcggtgga
atgggagcccagggaggcattgagcgtgttcgctccatctttgagagggcgctgactgca
gtaggcttacacatgactaaaggagcttcaatctgggaggcctacagggagtttgagatt
gttattctctccacagtccagcctcctcctggcagcgttgcatcaaaggagcagcaggag
ctgctgaatgcccagctcgaacgcatacacaaactctttagacgacagctagctgttcct
ctgatggatatggaggggacgtatgcagagtactcggattgggctgacgacggcgtacct
gagacggtcacgcaccagtacagacattcccttcaacagttggagaaatgcaaacctttc
gaggaggctttgctggtctctgaacctccaaagctggcagagtatcaagcttacatagat
ttcgagattaaggaaggagatccagctcgtgtccagatcatattcgagcgagcgctggca
gagaactgcctcgtgccggacctgtggatcaaatacacctcatatctggatcgtcagttg
aagattaaagacctagttttatctgctcatgagcgggccgtcaggaactgtccctggacc
atgagtctatggaagagctatcttttggctctagagaggcatggagctgaccatcagaca
gtgacagatgtgtttgaaaaggccctgaacgcagggttcatccaggcggctgattatgta
gaaatctggcaatctaatctggactacctgagaagacgtgttgattttagcaaagaatgg
agcagggagttggacgagctgcgggcagcttttgcacgctcccttgactacctgaaacag
gatgtaaaagagaggttcagtgaaagtggagatctgtcctgcataataatgcagatctgg
gcaaggatagaggccttacattgtaagaacatgcagaaggcccgtgaactgtgggacagc
atcatgacaaaaggcaatgcaaaatatgccaacatgtggctggaatattacaacctggaa
aggtcatatggagatgctgctcactgcaggaaggctctccacagagctgtacagtgtaca
tcagactaccctgagcatgtctgtgatgtcctgctcaactttgaaagagtggagggctct
ctggaagactgggatgctgcagtccaaaaaacagagactaaactcaacagagtcaatgag
cagagagcaagagtggctgaaaaagaggctgtcctagccagacaagaagaggagaaagct
gagcacaggagaaaagccaaggccgataaaaaagcccaaaagaagagccagaaagcaaac
agtactggggataaacggaaagctgaagatgaggacgaggatgaatggggagaggatgaa
gagctgccatccaagaggctccgaggggaggaggactttggtagcacagccacagaggag
cacatggagacagaaagtgggcttttcagtcgacgagctccaccaccacgtaaatctgag
ccacccagtttccataagaaccaacagggactgtctgaagccccgcgacagccccaggag
cagcgcagagatgaagattgtgtatttgtcagtaacttggcttttaatctggaggaccca
gagggcaagatgcgaacattgtttcagggttgtgggactgtacagcaggtgcgacccgtg
tttacaccgaaaggtgtgtttagaggctattgctatgtgcagtttgaggacagggtggct
gtatccgaggcactgaaactggacagacaggaggtggatgggcggcccatgtatgtgtct
ccttgtgtggacaagaataagaatcctgacttcaaggtttttaagtacaaaacagcaatg
gagaagcacaagatctttatctctggcctgccgtactcctgcactaaagagacactggag
gatctctgtaaacagcatggcacagtgaaaaccatccggcttgtcaccaaccgctccggc
aaacccaagggtttggcgtatgtggaatatgagaatgaagcgcaggcctcgcaggctgtg
atgaagatggatggcaccatgttggaaaacttcacaatctctgttgccattagcaaccct
ccgagcaggaagatggaagataaagcagcaccaagtcgaatcctgggggcatcgacactg
aggcaacctcagggagcaagaggaaaaggacgcactcagatctctctgctgccacgctct
ctgtaccgacagagtgctccagatgccaaagcagagaacgggactgtttctgcaccacac
gccacagtgaccgatggagtgcatgaaggacctggaaccacaagcctggacacccaaacc
aagcctctgtccaacgaagactttgccaggatgctcctcaaaaagtga
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