Carassius gibelio (silver crucian carp): 127957808
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Entry
127957808 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127957808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127957808
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127957808
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127957808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
Prok-RING_4
FANCL_C
zf-C3HC4_3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
127957808
NCBI-ProteinID:
XP_052412452
LinkDB
All DBs
Position
B5:9492927..9579646
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AA seq
849 aa
AA seq
DB search
MRVPVRRLAGLWPWLLMAASQVALGHTGLELAAAVESERSAPRAMIKVSLLKQEPTSRPI
TLEGVFAGGSAGYAEGKLMQSHPLSLCNTSEDDRQETFFISIVKLESPESKVPQCLPLLD
KARLALQRGAQAVIFDITDDPGAAQELRDSGLLPRPVVLVKSSDAEKLMGLVNKNEEAKV
FIDIMMETQKWPHYDVGILLTVSLVVLAIIMIFALRFRCKPNRTWDSVHQQTLRAISRLE
TRTYSSQSCSGSQRSRGAPGSNSSSNSSPICAICLEEFMDGQELRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGKQPQGSDLASHQPQRSQMPPPRPEHSQAFLLPHNYSNQHPYPQ
HHVPFSLRHHYPHNPSGPLPQLDNYGNSPPLHPRTVHCFPSRPLGASCAYHLAPDAHHGR
LQRTGGHGFRTGHAAPRRSCQRCPGGPLRNSSGSRMHHVVSPANHATHHHLPRGGGSHSR
QDDGSASGGSYHTERSGYLADGPASDSSSGSCHGSSSDSVLNCTDISLQGVYGSWSTFRS
SLSSDYDPFIYCGPGKAPRRGSIEATQRPRSLDSVVNRTGGGSAGDAGAICLEEQQQQVA
VFSHVHYHRHRHHYYEDGELSQGPGRGYDEDQGATSSATAASGPCLITKDKDSSGCQVQV
QSCHCPKTDLSSRRVEDRDLDPVTSSGASVILPSPLLNSPSPPCCHKGPGWTTGRKAAGR
PMEVPSPVVHFHQSMDLQDDCSIHIHYGQGAGSFCCTPPPDMAPTLLPVPLILDSTGMTD
WPCCSGARVLWQKEVQQAHSEPQLLGPTSGMDRPLCRTHHGPGDELPMDICLYCQTLHNS
QGSEEESGV
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagggtccctgtgcggcgactggccgggctctggccgtggctgctcatggctgcctcg
caggtggctctgggtcacacaggcctggaactagctgctgctgtggagtccgagcgctcc
gcaccccgagccatgatcaaggtgtctctgctgaagcaggagcccaccagcaggcccatc
accctagaaggggtgttcgccgggggcagcgcaggctatgctgaaggcaaactgatgcag
tctcatccactgtctctgtgtaacaccagtgaagatgaccgtcaggagaccttcttcatc
agcatcgtcaaactcgagagtccagagagcaaagtgccacagtgcctgccgctgctggat
aaagctcgtctggctcttcagagaggcgctcaggcggtcatctttgacatcacagatgat
cccggagctgctcaggagctgcgtgattcaggtttgttgcctcgtccagtggtgctggtg
aagtcatcagatgcagaaaaactgatgggactcgtcaataaaaatgaagaagccaaggtg
ttcatagatatcatgatggagactcaaaaatggcctcattatgatgtcggcatcctgttg
actgtgtctctggttgttttggccatcatcatgatctttgctctacgcttccgctgcaag
cccaacagaacctgggactctgtgcaccagcagaccttgcgtgccatcagcaggttggaa
acgcgcacatacagttctcagagttgctctggctcccagcgctctcgtggggctccaggg
tcaaacagcagctccaattccagtccaatctgtgccatctgtcttgaggaattcatggat
ggccaggaattgagaatcatctcctgtgctcatgagttccataaggagtgtgtcgaccca
tggctcctacaacaccgtacctgcccactgtgcatgcacaacatcatgggtaaacagcct
cagggttcagatctggcatcccatcagccccaaagaagtcaaatgccaccccctcgacct
gagcacagtcaagccttcctccttccccataactattcaaaccaacacccttatccccag
caccatgttcctttttccctgcggcatcattacccccataatccctctggacctttaccc
caattggacaactatggcaactctccccctcttcatccacggactgttcattgctttccc
agcagaccactgggtgctagctgtgcgtaccacttggctccagatgcccatcatggacgt
ctgcaaaggacaggtgggcacgggtttcggaccgggcatgcagctcccagaaggtcgtgt
cagcggtgtcctggaggacctttgcggaactcttcgggttctcggatgcatcatgtggta
tcgcctgcaaaccatgcaactcatcatcacctgccacgtggaggaggctcgcacagtcgc
caggatgacggcagcgcctcgggagggagttaccatacggagcgtagcggttaccttgca
gacggacctgccagtgattccagctcgggatcgtgccacggctcgtccagtgactccgta
ttgaactgtacggacatcagcctgcagggtgtctatggcagctggtccacttttcgtagc
tcgctcagcagcgattacgacccgtttatctactgcggaccaggcaaagctccacgcaga
gggagcatagaggccacgcaaaggcctcgttccctggattctgtagtgaaccgaaccggt
ggtggaagcgctggtgatgccggtgccatttgcctggaagaacagcagcaacaggtggct
gtgtttagtcacgttcactatcacaggcatagacaccactattacgaggatggggaactc
agtcaagggcccggccgaggctatgacgaggatcaaggagccacgtcctcagccacagca
gcaagcgggccttgtctcataactaaagacaaagactcctccgggtgtcaggtacaggta
cagtcttgccactgccccaaaacagacctcagttcaaggagggttgaggatagagacctg
gaccctgttacctcctcaggtgcctccgtaatccttccgtctcctcttttaaactctccg
tccccaccctgttgccacaaaggcccagggtggacgaccggtcggaaagcagctggacgt
ccaatggaagtgccttcgccagttgttcactttcatcaaagcatggaccttcaggacgat
tgtagcattcatatacactatggacagggagcgggaagcttttgctgcacacctccgcca
gacatggcccccacgctactgccagtgcccctgatcttggactcgacgggtatgaccgac
tggccgtgctgtagtggggcacgtgtgttgtggcagaaggaggtgcagcaggcccattca
gagcctcagctcctgggacccacttctggaatggacagacccctgtgtaggacccaccat
ggcccaggggacgaacttcccatggacatctgtctgtactgccaaactctacacaatagt
caggggtcagaggaagagtctggtgtttga
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