Carassius gibelio (silver crucian carp): 127957830
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Entry
127957830 CDS
T08819
Name
(RefSeq) uracil-DNA glycosylase-like isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127957830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127957830
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
127957830
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127957830
Prokaryotic type
127957830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
127957830
NCBI-ProteinID:
XP_052412492
LinkDB
All DBs
Position
B5:complement(496807..508453)
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AA seq
305 aa
AA seq
DB search
MIGQKSITSFFSPVSKKRNLNEILTCLGDATEHEKKLKLERDDVTSPLSLSPEQLERISK
NKKAALERLAANQAEPNGIGESWMKALSAEFGKPYFKLLMSFVAEERQKHTIYPPENEVF
TWTQTCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPRYCPAVINLVNIFKELAS
DIEGFEQPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVIHWLSTNMQG
LIFILWGSYAQKKGAAIDKKRHNVLQTVHPSPLSAHRGFFGCKHFSKTNELLKKSGKKPI
DWKAL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgattggacagaaaagtatcacctcgtttttttcgccagtatccaaaaaaagaaatctg
aatgagatacttacatgcctaggggatgcaacagaacatgagaaaaaactaaagttggag
cgcgacgatgttacatccccactgtccctgagtcctgagcaacttgaacggatatccaaa
aacaagaaggcggctctggaaaggctcgctgcaaaccaagctgaaccaaacgggattgga
gagagctggatgaaagcgctcagcgcagaattcggaaagccctactttaaattattaatg
tcttttgttgctgaggagaggcaaaaacacaccatctatccacctgaaaatgaagttttt
acctggacacaaacatgtgacataaaagatgttaaggttgtgattcttggccaggatcct
tatcatggacctaaccaggctcatgggctttgtttcagcgtgcagagacctgtgccgcct
ccaccaaggtattgccctgcagtcatcaacttggtgaacatctttaaagaactggcttca
gacattgaaggatttgagcaacctggtcacggagatcttacaggatgggcaaagcaagga
gttctgttgctgaacgctgtgctgactgtgcgtgcacaccaggccaactctcacaaagac
aaggggtgggagactttcactgacgctgtgatacactggctcagcactaacatgcagggt
cttatttttattctctggggctcttatgcgcaaaagaagggggctgccattgacaagaaa
cgacacaatgttctgcaaacagtccacccttcgccactgtctgctcaccgtggcttcttt
ggatgtaaacatttctcaaagaccaatgaactgctgaagaaatcaggaaagaagcccatt
gactggaaagctttgtga
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