Carassius gibelio (silver crucian carp): 127957908
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Entry
127957908 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32-like
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127957908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127957908
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127957908
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127957908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
zf-RING_4
zf-B_box
Motif
Other DBs
NCBI-GeneID:
127957908
NCBI-ProteinID:
XP_052412576
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All DBs
Position
B5:complement(16745135..16751482)
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AA seq
661 aa
AA seq
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MATPTSLDPDLVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCGSTMGLMCKSCKNRLPRQYCCDCSILLCDI
CKNEGHECQGHFVQAIRVAAEQRRKEISGKLSNLRGSMGNIQKKKAAIDNMTKSLKLKYK
AVQQEYAKAELQLQEELGRSRRAFTTSLAEIEKLNAQILEEQTYLLSIAEVQVVSRCDYL
TMRIKQTDVALLEEGSNNEEEELDFKTNLPVILKLQEPEFVKTECSKSLEVGQLTTKPCT
VNAEEEDRLDFAASIATPLDIYRDIDMETTVEEAVCASPGSFKSKSVDGGGPSPGASGGQ
LCQFVKKMGCKGNLPGMFNLPVSICVTLQGEVLVADRGNYRIQIFNRKGFQREIRRNPSS
IDNFVLSFLGADLPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGHCIACHKNQLIKPW
GIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVTCDSSGTVYFTQGL
GLNIENRHNEHHLEGGFSIGSVGMDGQLGKQLSHFFSEAEDFRCITGMCVDSNGDLIVTD
SGRKEILQFPKEGGYNILIQEGLTCPVGVAVTQKGQLLVLDCWDHCVKVYTYLQRRRSST
C
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccaacgtctttagatccagatttggttcgggaggtcctggaatgtcccatt
tgtctggagacctacaaccaggatcagcttcgacccaaactgctgcagtgtggtcactct
gtgtgtcgccaatgccttgagaaactcctcgccagtacgataaatggcgtgcgctgtccc
ttctgcagcaaggtgtctcgtatgagcagtatttcccagctggctgacaatctcactgtg
ttgaagatcatcgactgtgcaagttcatgtggctctactatgggtctcatgtgcaagtct
tgtaaaaatcgcctgccccggcaatactgctgtgactgcagcatcttgttgtgtgatatt
tgtaaaaatgagggtcacgagtgtcagggtcacttcgtgcaggccatacgtgttgccgct
gaacagcggcgaaaagaaatcagcgggaaactttctaacttgcggggctcaatgggaaac
attcagaagaagaaggcagctatcgacaacatgacaaaatcactcaaactgaagtacaag
gctgtacagcaggaatacgccaaggctgagttgcagctccaggaggaacttggccgttca
cgccgtgccttcaccacctccttggccgaaatagaaaaactcaatgcccagattctggag
gagcaaacgtacctgctcagtatcgctgaagtgcaggtggtgtctagatgtgactatcta
accatgaggatcaagcagacggatgttgccctactggaggaagggagcaacaatgaagaa
gaagagttggactttaaaaccaatctgcctgtcattctaaaacttcaagaacctgaattt
gttaaaacggagtgctcgaaatccttggaagttgggcaactgaccacaaaaccatgtact
gttaatgcagaggaagaagacagacttgatttcgccgcttccattgccacccctttggac
atttaccgtgatattgacatggaaacgacagttgaagaggccgtttgtgcttctcccggc
agcttcaagtccaagtctgttgatggaggtggaccttctccaggtgcttctggtgggcaa
ctctgtcagtttgtgaaaaagatgggctgcaagggcaatctgccgggcatgtttaacttg
ccggtaagcatttgtgtcacactgcagggcgaggtgctcgtggccgaccgagggaactac
cgcatccagatctttaaccgcaagggcttccaaagggagatacggcgtaacccgagcagc
atcgacaactttgtcttgagtttcctaggtgctgaccttcccaacctcatcccactctcc
attgcaatcactgctcagggcctcatcggcgtcaccgataactatgacaactctgtgaaa
gtttacaccacagatggccactgcattgcttgtcacaagaaccagctcatcaagccatgg
ggaatcgcggccatgccttcgggccagtttgtcgtgtcagatgttgaggggggaaagctg
tggtgcctggccgtggatcgtaatgtaggggttgtgaattataaccgcttatgttcagcc
gtcaggcccaaatttgtaacttgtgactcctcaggtacagtctacttcacacagggcttg
ggtctaaacattgagaatcgacacaatgaacaccaccttgaggggggtttctcaatcggc
tcggtgggaatggatggccagctgggaaagcaactaagtcatttcttttcagaggcagag
gactttcgatgcatcaccggcatgtgtgttgactcgaacggggacctgatcgtaacagac
agtgggcgtaaggagatattgcagtttcctaaagaaggtggctataatattctcattcag
gagggcctaacctgccctgtaggggtggctgttacacaaaagggtcaactgctcgtctta
gattgctgggaccactgtgtgaaggtctacacttacttgcaaaggagacgttcctctact
tgttaa
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