KEGG   Carassius gibelio (silver crucian carp): 127957979
Entry
127957979         CDS       T08819                                 
Name
(RefSeq) polyubiquitin-C
  KO
K08770  ubiquitin B/C
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03320  PPAR signaling pathway
cgib04120  Ubiquitin mediated proteolysis
cgib04137  Mitophagy - animal
cgib04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127957979
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127957979
   04137 Mitophagy - animal
    127957979
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    127957979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    127957979
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127957979
Ubiquitin system [BR:cgib04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   127957979
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   127957979
  Exosomal proteins of other body fluids (saliva and urine)
   127957979
  Exosomal proteins of colorectal cancer cells
   127957979
  Exosomal proteins of bladder cancer cells
   127957979
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 127957979
NCBI-ProteinID: XP_052412702
LinkDB
Position
B5:complement(29361182..29364296)
AA seq 535 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGSDI
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgcagatctttgtcaaaaccctcactggcaagaccatcacccttgaggttgagccaagc
gacaccattgagaacgtcaaagccaagatccaggacaaagaaggcattccccctgaccag
cagaggctgatctttgccggcaaacagctggaagatggtcgcacactgtctgactataac
atccagaaagagtccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttc
gtcaaaaccctcactggcaagaccatcacccttgaggttgagccaagcgacaccattgag
aacgtcaaagccaagatccaggacaaagaaggcattccccctgaccagcagaggctgatc
tttgccggcaaacagctggaagatggtcgcacactgtctgactacaacatccagaaagag
tccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctc
actggcaagaccatcacccttgaggttgagccaagcgacaccattgagaacgtcaaagcc
aagatccaggacaaagaaggcattccccctgaccagcagaggctgatctttgccggcaaa
cagctggaagatggtcgcacactgtctgactacaacatccagaaagagtccaccttgcat
ctggtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctcactggcaagacc
atcacccttgaggttgagccaagcgacaccattgagaacgtcaaagccaagatccaggac
aaagaaggcattccccctgaccagcagaggctgatctttgccggcaaacagctggaagat
ggtcgcacactgtctgactacaacatccagaaagagtccaccttgcatctggtgctgcgt
ctcaggggaggcatgcagatcttcgtcaaaaccctcactggcaagaccatcacccttgag
gttgagccaagcgacaccattgagaacgtcaaagccaagatccaggacaaagaaggcatt
ccccctgaccagcagaggctgatctttgccggcaaacagctggaagatggtcgcacactg
tctgactacaacatccagaaagagtccaccttgcatctggtgctgcgtctcaggggaggc
atgcagatcttcgtcaaaaccctcactggcaagaccatcacccttgaggttgagccaagc
gacaccattgagaacgtcaaagccaagatccaggacaaagaaggcattccccctgaccag
cagaggctgatctttgccggcaaacagctggaagatggtcgcacactgtctgactacaac
atccagaaagagtccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttc
gtcaaaaccctcactggcaagaccatcacccttgaggttgagccaagcgacaccattgag
aacgtcaaagccaagatccaggacaaagaaggcattccccctgaccagcagaggctgatc
tttgccggcaaacagctggaagatggtcgcacactgtctgactacaacatccagaaagag
tccaccttgcatctggtgctgcgtctcaggggaggttcagatatttaa

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