Carassius gibelio (silver crucian carp): 127957994
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Entry
127957994 CDS
T08819
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127957994
Membrane trafficking [BR:
cgib04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127957994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
Ank_2
PH_13
C1_2
DUF2205
PHD
NPV_P10
Phage_GP20
PilJ
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
127957994
NCBI-ProteinID:
XP_052412722
LinkDB
All DBs
Position
B5:32831232..32887586
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AA seq
1827 aa
AA seq
DB search
MELSRGEVPLYGQVEVCVKLQVSPSVQEEADYFVVLLGSSLHHVTKAHRAEDQGSVKFTV
PGHDVPEKVSVEVYCCSRDSRSPTSLLCNSGELSLEYIRDEAQEVAEQLVNLTSSSYQEI
LRKFCPEKMFASETNQTGQPVTDGVCDPKELFRLGSLAEQGLSIYEQGHFSQREASGTSE
FNPEHRCTVGQHSAVDEKITQALANLHFLGWDSQAGQETQDPHSGATPLHVAIHMGFPHL
SHFLFQESEGQRMVPIVDKEGHSPLTLAQKHGDPTLISALTDPSSCSAWRPVWMCQIWTD
GSNQLRICPVTESISLTVKNSTHINAQHSIQLYREKSREPDALARVGRLSEPPEESIHRS
DICDTDLNSQLRIEDEALVDSVFEEQLVLCLDEEDEDLNTFNSEKLCSSPGSCTPFHLHS
SDAAAVRLTAMLRGSAKDSDLNMKYAVSGVTEDSSGTDSGVWRMSDTGVLSPGTVDIPPA
VKDDEGQRGRQHASHSFSPTSPAGLMLERLMRATRPAELTYNSSNSPTESCDLSPSLVAL
EMDSEEDDDDDILMKKPLPQLQPELKNSPDERIMFKPAPDLTCTRSHSASSACNPTPAKD
IEQGIRLRSYSYTSPKISLLPPRFSRDAHPPPTDLNQDGALSSSSGSRSLLQALSLSKSL
SLLNPVKHRVCSTSEQPQEKRELRFRRRAQSADDETSAELASSLQHLTLSEFLKEIEEEE
WDKYIIPSKTESEKYKVSRTFSFIKSRMYSTRNKNKGKGKERETKDKQVNGHQFTAGSVL
GSTLCEICGKPALGKEVLHCTHCAVSVHKGCKDSSSPCLKKPQDKSSVMSVKSRTASLPQ
NFIVHESSSSSSLIPTSASLPVMTSRDSAPLPCPLSRSVPAVTERLSGSPEADSDAPLWR
NHIQPEELLQTMESSTSTDSSLIEGQTDSVDSPIQNELVMNAADLEVESWSLAVEPQFCK
MQEKRIIKRQDVIYEFMQTERHHVQTLMIMAEVFRRGMREEVGLDVDTIGRIFPCLDELL
LLHRDFLSAMRERRQSSIQPNSSKNYLIHRVGDIFLQQFSQENAEKMKQVYGEFCSRHTD
AVSYFKELQQQNKRFQLFIKQQSSNLLVKRREIPECILLVTQRITKYPVLLERILHYTEE
GTEEHADLSRALVLIRELISAVDQRVSQYEQNQKLSEVLGRMENKCSTKLKSGYTFRKQD
ITSGRALLHQGPLLWKTATGRLKDVLAFLLSDSLVFLQEKDQKYIFAAVDQKPPVISLQK
LIVREVANEERGMFLISASSAGPEMYEVHAASKDERNAWMRLIREAVESCPEEEDETTSE
SEEERRVTEAKVQKIHRIQESLCGHDNLICANLEEKLHIYTELSVMAGRRETGPEPRLLV
RPSTEDIPQAGVLLSAALKEAENLKAALSSHCASAAAVPSCPEEQTQLEPCSPSSPLSPE
NQSPLMDPVQRNEEEGRGEEGLETQAFNHSSDADYNIHLKVSQSVQSLTQLLYSLQAAVT
IQDSCYEVQKLLLLLLSSPSPHPHSRPLPITRSNQTLQEQERQREAERRREELADVARLR
GTLVRERQQWERECQVRQLQQSELEASLEQRELVCHLEEGRLQSERQELEEQLQEYQQSL
ERLREGQRTVEKEKEKLDAQRRLLESLKQGYQQNLPAMVIPLDGLQTQDTGHHNLSGPDE
RGSIFVNEAAFMSPSMNNRHIHLQHHPHRHHQTVHLHSGYSDSPSAQNSLNSLLARSNHR
QSSAGVSDAPAGHESWTGGTVYLTPRRSPTEIPNNDVGQLGHVQDSWSAGVTGAGLHQAD
VPLVNQPFVTMETENRDTDGEENIVYL
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggagctcagcaggggagaggtgccactttatggtcaggtggaggtctgtgtgaagctg
caggtgtcgccgagtgttcaggaagaagccgactactttgtggtccttctgggctcgtcc
ctacaccatgtaaccaaagctcacagggccgaggatcaaggctcagttaaattcactgtg
cctggccacgatgttccagagaaagtatctgtggaggtctactgctgttcgagggacagc
aggagtcccaccagcctcctctgcaattcaggagagctctctctggagtacatacgggat
gaggcacaagaggtggcagagcagctcgtgaacctgacgtccagcagctatcaggaaatc
ctaaggaaattctgcccagagaaaatgtttgcatctgagactaaccagactggccagcct
gtgactgatggggtttgcgatccaaaggaattatttcgattgggaagtctagcagaacag
gggctcagtatttatgaacaggggcatttcagccagagggaagcctcgggaacatcagag
tttaatccagagcacagatgcacagtgggacaacacagtgcagttgatgaaaaaatcaca
caggccctggctaacttgcactttctgggatgggacagccaagctggacaggagacgcaa
gatccccattccggggcaacgcctctacatgtggccatacatatggggttcccccacctc
agtcacttcctcttccaggagtctgaaggtcagaggatggttcccatagttgacaaggaa
ggccacagtcctctcacgctggctcagaagcacggagacccgacgctcatcagcgctcta
acagatccctcgagttgcagtgcgtggaggccagtgtggatgtgtcagatttggacagac
ggctctaaccagcttcgtatctgccctgtcaccgaatctattagtctgactgtgaaaaac
agcacacatataaatgcacagcacagtatccagctgtacagagagaagagccgagagcca
gatgcacttgcaagggtgggacgactgagtgagccgccagaagagagcatacacagatct
gatatatgtgacacagatttgaacagccagctgagaatcgaggatgaagccctggtggat
agtgtctttgaagaacagcttgttctctgtctggatgaagaggacgaagatctaaacaca
tttaactcagagaagctgtgttcctctcctggctcctgcactccatttcaccttcattcc
tcagacgctgctgccgtcagactcacagccatgctcagaggctccgctaaggacagtgac
ctcaatatgaagtacgctgtttccggtgtcacagaggacagctctgggacagatagtggt
gtgtggcgaatgtcagatacaggggtcttgtcaccagggactgtagatatccctccggct
gttaaagatgatgaagggcagagaggacggcaacatgcttctcattctttctctcccacc
tcccctgcgggactgatgctggaaagactaatgcgtgccacacgacctgctgaattgaca
tataacagctcaaactcacctacagagtcatgtgacctaagcccgagtctggtggccttg
gaaatggacagcgaggaggacgatgatgatgacattttaatgaagaagcccctcccccag
ctacagccggagctcaaaaacagcccagatgaacggattatgtttaagcccgcccctgat
cttacctgcacacgttctcactccgcctcctctgcctgtaaccccacccctgcaaaggat
attgagcagggcatccgtcttcgttcatattcctacacctcgcccaaaatcagcctgctg
cctccacgattcagtagggatgcccaccctccacctactgacctcaatcaggatggcgcc
ctctccagcagcagtggcagcaggtctctactacaggcactgtctctgtctaaatctctg
tctctgctcaaccctgttaaacatcgtgtctgcagcacatcagagcagcctcaagagaaa
agggagttaaggtttcgtagacgtgctcagtcagccgacgatgagaccagcgcagagctg
gccagctccctccaacacctcacgctgtccgaattcctcaaagagatcgaggaagaggaa
tgggacaaatatatcatcccttccaaaaccgagtcagaaaaatacaaagtcagccgcaca
ttcagctttataaagagccggatgtatagcactcgcaacaagaacaaggggaaaggaaaa
gagagagagaccaaagacaagcaggtcaatggacaccagttcacagcgggatctgtcctg
gggtcgacactttgtgagatctgcggcaagccagcccttgggaaagaggtcctccactgc
acacactgtgcagtgagtgtccataagggctgtaaggactcatcttcgccatgcctgaag
aaacctcaagataaatcttctgttatgtctgtaaaaagcaggacagcctcccttcctcag
aattttatagtgcacgaaagttcctcctcgtcctctctgatccccacctctgcctctctt
cctgtgatgacatcacgagactctgctccccttccttgccctctgtctagaagtgtgcca
gcagtcacagaaaggcttagtggtagcccagaggcagatagtgatgcccccctatggcgg
aaccacatccaaccagaggagctcctccaaaccatggagtcctcaacatccactgattcc
tcgcttattgaaggtcaaacagactctgtagattcccccatacagaatgagctggtaatg
aatgctgctgatttggaggtggagtcatggagcttagcggtggagccccagttctgtaag
atgcaagaaaaacgcatcatcaagagacaggatgtaatttacgagttcatgcagactgag
cgccaccacgtacagacgctcatgataatggcggaggtcttcaggcggggaatgcgggag
gaagtcgggctggatgtggacactattggtcggattttcccttgcttagatgagctgctt
ctcctccaccgtgacttcctgtcagcgatgagggaacggagacaaagcagcattcagccc
aacagcagcaagaactacctcatccaccgtgtgggtgacatttttctgcaacagttctcc
caggagaatgcagagaagatgaagcaggtgtatggcgagttttgcagtcgtcacacagac
gcggtcagctatttcaaagagcttcagcagcagaataagagatttcagctcttcatcaaa
caacagagtagcaacttgttggtaaagaggcgagaaatcccagaatgcattttgttagtg
acgcagcggattacaaagtaccccgtcctcctggaaagaatactgcattatacagaggag
ggcacagaagaacatgctgacctgtctcgtgcactagtcctgatccgagagctgatatcc
gctgtggaccagcgtgtgagtcagtacgagcagaaccagaagctgagtgaggtcctgggc
cgcatggagaacaagtgctcgactaaactcaagagcggttacaccttccgcaagcaggac
atcaccagtggcagggctctgctgcaccagggaccgctgctctggaagacggccacagga
agactgaaagatgttctggcgtttttgctgtctgattcgttggtgttccttcaggagaaa
gatcagaaatacatctttgctgctgtggaccagaagcctccagtgatctctctccagaag
ctgatcgtgcgtgaggtggccaatgaggagagaggcatgtttctgatcagtgcgtcttca
gctgggcctgagatgtatgaagtacacgctgcttctaaagatgaacgcaatgcttggatg
agactcatcagggaggctgtggaaagttgccctgaagaggaggatgaaactacaagtgag
tcagaagaggaaaggagagtcacagaagcaaaggtccaaaagatccacaggatacaagag
tctttgtgtggccacgataacctcatctgtgccaatctggaggagaagctacacatctac
actgagctgtcagtcatggcaggacgacgtgagacaggaccagagcccagactgctggta
cggcccagcactgaagacatccctcaggccggagtactgctcagtgccgctcttaaagag
gcggagaacctgaaagcagccctctcttctcactgtgcttctgctgccgctgtcccgtct
tgtccagaagagcagacccaactcgagccttgctctccttcctcccctctgtcccctgag
aaccagagtccactgatggaccccgtccagaggaatgaggaagaggggagaggagaggaa
ggcttagaaacacaggcctttaatcacagctcggatgctgactacaatatacacctaaag
gtgagtcagagtgtgcagagcttgactcagctgctatacagtctacaggcagcagtcacc
atccaagacagttgctatgaagtccagaagctcctcctcctcctgttatcaagcccctcc
cctcacccacactcccgcccactgcctatcactcgcagcaaccagaccctgcaggagcag
gagcgccagcgggaggcggagcgtcggcgagaggagctggcggatgtggcccgtctacgg
ggcacactggtacgagagaggcagcagtgggaacgggagtgccaggtgcgccagcttcaa
cagtctgagctggaggcatcactggagcagagggagctggtgtgccacctagaggagggg
aggctgcagagcgagcgacaggagctcgaagagcagctgcaggagtaccagcaaagcctg
gagagacttcgagaaggccagaggactgtggaaaaggagaaggagaagctggatgctcag
cggaggctgctggagagtttgaagcagggctaccagcagaacctgccagctatggtcata
ccattggatggactccagacacaggacacgggtcaccataacctaagtggaccggatgag
cgcggatctatttttgtgaatgaggcagcatttatgtctccctccatgaacaacaggcac
atccatcttcaacatcatccacaccgtcatcatcagactgtccacctgcactcaggatac
tcggattctcccagcgctcagaacagtctcaattcactcctggcacgatccaaccacaga
cagagctctgcaggagtatccgatgctcctgcagggcacgagagctggactggaggaaca
gtgtacttgacccctcggagaagtccaacagagatcccaaacaatgatgtgggtcagctc
ggccatgtccaagactcttggtcagctggtgtaacaggggcggggcttcaccaagccgac
gtcccgctcgtaaaccagccctttgttaccatggagacagaaaacagagatactgatgga
gaggagaatattgtgtatctttga
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integrated database retrieval system
