Carassius gibelio (silver crucian carp): 127958002
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Entry
127958002 CDS
T08819
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127958002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127958002
Spliceosome [BR:
cgib03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
127958002
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
127958002
NCBI-ProteinID:
XP_052412742
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All DBs
Position
B5:17688090..17693995
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AA seq
498 aa
AA seq
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MIAGVKRERDVDEDEEEEVRVKIGRSHGVEDRRSRHCPYLDTINRSVLDFDFEKLCSISL
SHINAYACLICGKYFQGRGQKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLED
ITYVLKPTFTKQHIAGLDKHGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPP
LRNYFLEEDNYCRIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSK
KTFQITSQGDAVDFLSWFLNALHGALGGTKKKTSIVSKVFQGSMRIFSKKLPHPDLSAEE
KEALLLKDEYQEKMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNIMAKFNGSNEKE
YKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQ
ATEKITTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVIDILPQMITLSEAYI
QIWKRQDKDEGAESHTGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaggcgtgaaaagggagagggatgttgatgaagacgaagaggaagaggtgcgt
gtgaaaattggtcgttctcatggtgttgaagatcgaagaagtcgccattgtccttatctg
gacacgatcaacaggagtgttttggattttgactttgagaagctttgttcaatctcgctc
tcacacattaatgcatatgcctgtctgatctgtgggaaatatttccaaggtcgaggtcag
aagtcacacgcgtacatccacagtgttcagttctcacaccatgttttcctgaatctccac
acgttaaagttttactgcctgccagacaattatgagattattgactcctcattagaggat
attacgtatgtgctgaaacccaccttcaccaaacagcacatcgctggtttggataagcat
gggaagctgtacagagcctacgatggcactacctatctgccgggaattgtgggtctcaat
aatatcaaggccaatgactatgctaatgtggttttgcaggcgctgtcaaacgtgccgcct
ctacggaactacttcctcgaggaggacaactactgcagaatccgccggccgccgggtgac
atcatgtttctgttggtgcagcgctttggggagctcatgcgcaagctctggaacccgcgc
aacttcaaagcccacgtgtcgccacatgagatgttgcaagctgtggtgttatgcagtaaa
aagacctttcagatcacttcacaaggggacgctgttgactttttgtcctggtttctcaat
gcattgcacggtgcccttggtgggacaaagaagaaaacatccatcgtcagcaaggtgttt
caggggtccatgcgaatcttctcaaagaagcttcctcatccagatttgtctgcagaagag
aaagaagcccttctgcttaaggacgagtaccaggagaagatgtctgagtccaccttcctg
tacctgacgctggatctgcccaccgcacctctctacaaagatgagaaggagcagctcatc
attcctcaggttcctctcttcaacatcatggccaagttcaacggaagcaatgagaaggaa
tacaagacttacaaagagaactttctgaaaaggttccagctcaccaaacttcctccgtac
ctcatcttctgcatcaagcgattcacaaagaacaacttctttgtggagaagaacccaact
attgtcaacttccctatcacgaatgttgatttgcgtgagtacctgaccgaagaggcgcag
gccacagagaagatcaccacttacgacctggtggccaatgtagttcacgatggaaaaccc
accgaagggtcctacaggattcacgttctgcatcatggcacagggaagtggtacgagctt
caggacctgcaggtgattgatatccttccacagatgatcacgctttcagaggcgtacata
cagatttggaagagacaagataaagacgagggagcagaaagccatacaggggcatag
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