Carassius gibelio (silver crucian carp): 127958136
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Entry
127958136 CDS
T08819
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127958136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127958136
03036 Chromosome and associated proteins [BR:
cgib03036
]
127958136
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127958136
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127958136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
127958136
NCBI-ProteinID:
XP_052412888
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All DBs
Position
B5:complement(31341404..31351874)
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AA seq
428 aa
AA seq
DB search
MAAVVENVVKLLGEQYYRDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYFWMEKR
HRGPGGTHSLAVVCLQNRSVAPGQLYTYPARRWRKKRRANPPEDPRLAFPSLKSELDLGL
KKDVFSSDGSSLEALLKGEPMDKRSGLELRTAEEDPSSTEYSSGGLNPSSRVRKKILEPD
DFLDDLDDEDYEEDTPKRRGKGKGKGRGVSSARKKLEATAALEDRDRPYACDNTFKQKHI
SKSSERVCGKRYKNRPGLSYHYAHSHLAEEEGEEKDEMDIREPTPPQQDEPKTPKKGPDG
LALPNKYCDFCLGDSSMNQKTGQSEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCI
ECKCCNMCGTSENDDQLLFCDDCDRGYHMYCLSPPMSEPPEGSWSCHLCLALLKEKASIY
QNQNAPPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtggtagagaatgttgtcaagctgctgggtgagcagtattacagggacgct
atggagcagtgtcacaactataatgcccgtctgtgtgcggagaggagcgtcaggatgccc
ttcctcgactctcagacaggcgtcgcccagagcaactgctacttctggatggagaaaagg
cacagaggaccaggtgggacccactcactcgcagtggtctgtttacagaacagaagtgtt
gccccaggtcagttgtacacatatccagcacgacgctggagaaagaagaggagggctaac
cccccagaggaccctcgtttagccttcccatctctaaagtccgagctggatctggggctt
aagaaagatgttttctccagtgatggcagcagcttagaggcacttctgaagggagagcca
atggacaaaagatctgggttggagctccgcacagcagaagaggatcccagctctacagag
tactcttccggcggtctaaaccctagcagcagggtccggaagaaaattttggagccagat
gattttctagatgatctggatgatgaagattatgaagaagatactccaaagagacgggga
aaaggcaagggaaagggtcgtggtgtcagcagtgctcggaagaagttagaagcaacagct
gctttggaggatcgagaccgaccgtacgcttgtgacaacactttcaaacaaaagcatatt
tcaaaatcttccgaaagagtctgtgggaagcgctataagaataggcctggtctcagttat
cattacgcccattctcacttggctgaggaggagggggaggagaaagatgagatggacatt
cgcgaacctacgccaccccaacaagacgaacccaagactcctaagaagggtccagatggt
ttggctctgccaaacaagtactgtgatttttgtctgggagattccagcatgaaccagaaa
accggccaatcagaagagcttgtgtcctgctcagattgtggccgttctggtcacccctcg
tgtctgcagttcactccagtgatgatggctgctgtgaaaacctatcgctggcagtgcatt
gaatgcaagtgctgtaatatgtgtggaacctcagaaaatgatgaccagctgttgttctgt
gatgactgtgatcgaggataccacatgtactgcctctcgccccctatgtctgaacctcct
gaaggaagttggagttgtcatctgtgtttggctctcctgaaagagaaggcctctatatac
cagaatcagaatgcaccgccctcatga
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