Carassius gibelio (silver crucian carp): 127958187
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Entry
127958187 CDS
T08819
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127958187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127958187
03036 Chromosome and associated proteins [BR:
cgib03036
]
127958187
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127958187
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
127958187
Chromatin remodeling factors
BAF complex
127958187
PBAF complex
127958187
GBAF(ncBAF) complex
127958187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
QLQ
HDA2-3
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
127958187
NCBI-ProteinID:
XP_052412943
LinkDB
All DBs
Position
B5:complement(28233327..28278885)
Genome browser
AA seq
1516 aa
AA seq
DB search
MSTPNEPSVAMSYAGPSPGAGLSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVTHAMQG
QGAGDYSQDMHSMHKPMDGMHEKGMGDDMHFGQMKGVGMKSLHSGIGPPQSPMDQHNQGY
MSPHPSPMGQVPENVPSPMSEGGPTPPQMSQDQSPMMPMDPQGMGQQARGLSAFSPVQLQ
QLRAQILAYKILGHGRPLPENLQLAVQGKRSLPTMQQQPINTGPYNRPPGEYAYGMPATG
PCPSPAMQTHIGSGPKPWPEGQSSETPSAPQKLLVPGPSGRPSPATPLAPTGTQPVPSTS
LTSQAQPQPPPPGPGPGQPSLIIQLQQKQNRIAPIQKPQGLDPVELLQEREYRYVMIFLI
AHRIQELENVPGSLPPDLRTKVTVELKXLRLLNFQRQLRLDVVACMRRDTTLETALNSKA
YKRSKRQTLREARRTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQ
KLSKAIATWHTNTEREQKKETERIEKERMRRLMAENEEGYRKLIDQKKDKRLAYLLQQTD
EYVANLTELVYEHKAAQAAKEKKRKRKKKKKEASDAEGMGAIGPDGELIDETSQMSELPV
KVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEDSGSEFEDEDDEEVASRAE
SEEKKVIDPNSDEVSETAAKHIIESAKQDADDEYSVQAGETSSQSYYGVAHAVIERVEKQ
STLLINGTLKHYRHITSLFVQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLM
ENKRLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYNGTPSMRRSLVPQLHSGKFIVXY
KYIIKDKQILAKIRWKYMIVDEGNRMKNHHCKLTQVDLNEEETILIIRRLHKVLRPFLLR
XSESQLPEKVEYIIKCDMSAIQKVLYRHMQGKCILLTDGSEKDKKGKGGGKTLMNTIMQL
KKICNHPYMFQHIEESFVEHLGFPNGIINGPDLYRASGKFELLDLILPKLKATNHRVLLF
CQMTSLMTIMEDFFAYRNFLYLRMDGTTKSEDRAMLLKKFNDEGSKYFIFMLSTRAGGLG
LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKIPAAAKYKL
NVDQKVIQAGMFDQKSSSHKHRAFLQAILEHEEQNEEEDEVPDDETLNQMIARNEGEFEL
FMRMDLDHRQEDARNPRRKPQLMEEDELPSWILKDDAEVERLTCEEEGEKIFGRGSRHRR
DVDYSDALTEKQWLRAIEDGNLEKIEEEIRLKRRKRRRHVDKDMRREDADKAKKRRGRPP
AEKLSPNPPKLTKQMNAIIETVINYRDAXVLSARQLSEVFVQLPSRKELPEYYELIRKPV
DFKKIKERVRNHKYRNVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKIK
WAFNRFVLFYMNYIYFLIQAKSVKVKIKLSKRDERCQDKGKKRPSRGKAKPVVSDDDSEE
EQEENEQSERSLSDDE
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctaatgagccatcagttgcgatgtcctatgctggtccctcaccgggtgct
ggcctgtctccggggcccattctagggccaagccctggacccggcccctctcctggctct
gtacacagtatgatgggccccagcccagggccaccaagtgtcacgcatgctatgcagggc
caaggggctggagactattcacaggacatgcactcaatgcataagcctatggatggaatg
catgagaaggggatgggagacgatatgcacttcggccagatgaagggggtgggaatgaaa
tccctacacagtggcataggtcctccacagagccccatggatcaacacaatcaaggctac
atgtcccctcatccctcgccaatgggccaggttccggaaaatgtgcccagccctatgtca
gaaggaggaccaaccccaccacaaatgtctcaggatcagtcacccatgatgcccatggat
ccacaagggatgggacagcaggctaggggtctgtctgccttcagcccagtccagctacag
caactaagggctcagatcctggcatacaagatcctgggtcatggacggcctctgcctgag
aatctacagttagctgtgcagggcaagaggagcctccccaccatgcagcagcagcccatc
aacactggcccctacaatagacctccaggtgaatatgcttatggtatgccagcaacaggc
ccatgtccctctccagccatgcagactcatatcggttctgggccaaaaccctggcccgaa
ggccaaagctcagagaccccaagcgctccacagaagctgttggtcccaggtcccagcggc
agaccctctccagctaccccgctggcccccactggcacccaacctgtgcccagcacctcc
ctcacctcccaagcacaacctcagccaccaccaccaggaccaggaccaggccagccctcc
ctcattatccagcttcagcagaaacagaatcgcatcgcaccgattcagaagcctcagggt
ctggaccctgttgaactcttgcaagagagggaataccggtatgtaatgatcttcttgatt
gctcacagaattcaggagctggagaatgtgccaggatcactgccacctgatctgcggact
aaagttaccgtggagctgaaanccttaagactgctcaacttccagcggcagttgaggctt
gatgttgtagcctgtatgcgccgagacacaactctggagacggccctgaactccaaagcc
tacaaacgcagcaagagacagacgcttagagaagctcgcaggacagagaaactagagaag
cagcaaaagattgaacaggagaggaagcgccgccagaaacaccaggagtatctcaacagc
attctgcagcatgcaaaagatttcaaggaatatcacagatccatctctggaaaaatccaa
aagctgtctaaagccatcgcaacatggcacaccaacacagagagagagcagaagaaggag
acggaaagaatcgagaaagagaggatgaggagactaatggctgagaatgaagaaggttac
aggaagctaattgatcagaagaaggacaagcgtctggcctaccttcttcaacagacagat
gaatacgtggccaacctgactgagcttgtctatgaacacaaggctgctcaagctgccaag
gagaagaagaggaagagaaagaagaaaaagaaggaagctagcgatgctgaaggaatggga
gccatcgggcctgatggagagctcatagatgagaccagccagatgagtgagctgccagtc
aaagtcattcagactgagacggggaaagtgctgcaggggacagatgcccccaagtccagt
cagttagaggcctggctcgagatgaaccctggctatgaagttgctccacggtcagacagt
gaagacagtggctcggaatttgaagatgaggatgatgaagaggtggcatccagagctgaa
tcggaagaaaagaaagtcatcgatcccaacagtgatgaagtatctgaaacggcagccaag
cacatcatagagtctgctaagcaggatgcggatgacgagtacagtgttcaggcaggagag
accagctcccagtcttactatggagtggcccacgcggtcatagaaagggtggagaaacag
tccaccctactgatcaatgggaccctcaaacattaccgccatataacaagcctttttgtt
cagatccagggtctggaatggatggtgtctctatacaacaacaacctgaatggtattctg
gctgatgagatgggactggggaagaccattcaaactatcgcacttatcacttatctgatg
gaaaacaagaggctcaacgggccatacctcattattgtgccgctctcgactttgtccaac
tgggtttatgagctggacaagtgggcaccaagtattgtgaaaattgcctacaatggcaca
ccatcaatgcgaaggtctttggtgccgcagctccacagtgggaagtttattgtcncttat
aagtacatcatcaaagacaagcaaattctcgccaagattcgctggaagtatatgatagtg
gacgagggcaaccgcatgaagaaccatcactgcaagctcacacaagtggatctaaatgaa
gaggagaccatccttatcattcgtcgtttgcataaggtgttacgtcccttccttctgcgc
nnctcagagtctcagttgcctgagaaagtggagtatatcatcaaatgtgatatgtcagcc
atccagaaggttctgtacaggcacatgcagggcaaatgcatcctgctcactgatgggtca
gagaaagacaagaagggcaaaggaggaggcaagaccttaatgaacaccataatgcagctg
aagaagatctgtaatcatccctacatgtttcagcacatagaggagtcctttgttgagcac
ttgggatttccaaatggcattatcaatggccctgacctgtaccgtgcctctggcaagttt
gaattactggacctcatcctgcccaagctgaaggccaccaatcacagagtgcttttgttc
tgtcagatgacctctctcatgaccatcatggaggatttttttgcctaccgtaacttcctc
tatctgcgaatggatggaactacgaagtctgaggatcgtgcaatgcttttaaagaaattc
aatgacgaaggctcaaagtatttcatcttcatgctgagcaccagggcaggaggtctgggc
ctcaacttgcaagctgcagacaccgttgtgatctttgacagcgactggaacccccaccag
gacttgcaggcacaggaccgagcccatcgtatcggccagcagaatgaagtacgtgtactg
cgtctgtgcactgtaaacagtgtggaggagaagattccagcagcggccaagtataaactg
aacgttgatcagaaagtcattcaggctggcatgtttgatcagaagtcctccagccataaa
cacagagccttcttgcaggctattctggagcacgaggaacagaatgaggaggaagatgaa
gttccagatgatgaaactctcaatcaaatgattgctcgtaatgagggcgaatttgagctt
ttcatgcgcatggatttagaccaccgtcaagaggatgcacgcaaccctaggcgtaaacct
cagctaatggaagaggatgagctgccatcatggatcctgaaggatgatgctgaggtggag
cggcttacctgcgaggaggagggggaaaagattttcggccgtggttctcgacaccgcaga
gatgtcgactacagcgacgcattgacggaaaagcagtggctgagggctatagaggatggc
aacctggaaaaaattgaggaggaaatacggctgaagaggcgcaaacgtaggagacatgtg
gacaaagacatgaggcgtgaggacgctgacaaagccaagaagagaaggggacgtcctcca
gcagagaagctctccccaaatccacccaaactcacaaaacagatgaatgccatcattgag
acagtcatcaattacagagatgcataagtgctatcagcccgtcagctcagcgaggtcttt
gtgcagctgccctccaggaaagagctccctgaatactatgaactgataaggaagccagtg
gacttcaagaagatcaaggagcgtgtgcgtaaccataagtacaggaatgtaagcgatctg
gagaaagacgtcatgctgctttgtcacaatgctcagacttataatctagagggctctcag
atctatgaggactccattgttctgcagtcagtattcaagagtgcaagacaaaagattaaa
tgggcttttaatagatttgtgttgttttatatgaattacatatattttttaatccaagct
aagtcagtgaaggtgaaaattaagctgagtaaacgggacgaaagatgtcaggacaaaggc
aagaagagaccaagtcgtggaaaggccaagcctgtggtcagtgacgatgacagcgaggaa
gaacaggaggagaacgagcagtcagagaggagcctcagcgatgatgagtga
DBGET
integrated database retrieval system
