Carassius gibelio (silver crucian carp): 127958425
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Entry
127958425 CDS
T08819
Name
(RefSeq) replication factor C subunit 5-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03030
DNA replication
cgib03410
Base excision repair
cgib03420
Nucleotide excision repair
cgib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127958425
03410 Base excision repair
127958425
03420 Nucleotide excision repair
127958425
03430 Mismatch repair
127958425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
127958425
03036 Chromosome and associated proteins [BR:
cgib03036
]
127958425
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127958425
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127958425
DNA Replication Termination Factors
ELG1-RFC complex
127958425
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127958425
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127958425
Check point factors
HRAD17(Rad24)-RFC complex
127958425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_14
AAA_24
RuvB_N
AAA_16
ResIII
DEAD
AAA_assoc_2
DUF815
PhoH
AAA_7
ATPase_2
AAA_5
TIP49
AAA_19
AAA_30
DNAX_ATPase_lid
AAA_2
Mg_chelatase
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
127958425
NCBI-ProteinID:
XP_052413242
LinkDB
All DBs
Position
B5:14684832..14692634
Genome browser
AA seq
334 aa
AA seq
DB search
MASSSKAQLQTRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLFYGPPGTGK
TSTILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQSQMIPRL
EHVIQQESIDITPDGMKAIVTLSTGDMRRSLNILQSTHMAYGKVTEEMVYTCTGHPLRSD
IANILDWALNKDFTTAYNQILQLKTLKGLALHDILTEVHLLIHRVDFPPSIRMGLLIKLA
NIEYRLASGTNEKIQLSSMVAAFQAVRDIVVSDG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcaagtaaagcacaacttcagacgagaaatttaccatgggttgaaaagtac
aggccacagacattagatgacctcatctctcatcaagacatcctgagcacaattcagaag
ttcatcagtgaagaccgattgcctcatctgctcttctatggacctccaggaacaggaaaa
acctctactatactggcatgtgccaaacagctgtacaaagataaagagttcaactctatg
gtcctggagctcaatgcgtcagatgaccgtggcatagatgtggtgaggggaccgatcctc
agctttgccagcacacgaaccatcttcaagaaaggctttaagttggtgattctggacgag
gcggatgctatgacccaggacgcacagaatgctttaaggagagtcattgagaagtttaca
gagaacacacgtttctgtctgatctgtaactacctttcaaagatcatccctgcgctgcag
tctcgatgcacacggtttcgtttcggcccactgtcccagagccagatgattcccagacta
gagcatgtgatacaacaagagagcattgacatcactccagatggcatgaaggccattgtg
accctttcaacaggagacatgaggcgatcattaaacattttacagagtacacacatggcc
tatgggaaggtgacagaggagatggtgtacacatgtacgggacacccgctcagatctgac
atcgccaacatactggactgggccctcaataaagacttcaccactgcatataaccaaatt
ctgcagctcaaaactctaaaaggtctggcacttcatgacattttaacagaagtccatctt
ctcattcaccgtgtggacttcccaccctccatccgcatgggcttgcttataaaacttgcc
aatattgagtatcgcctggcctccggaaccaatgagaagatccagctcagctcaatggtt
gcagctttccaggctgttagagacatcgtagtcagcgatggatag
DBGET
integrated database retrieval system
