KEGG   Carassius gibelio (silver crucian carp): 127958429
Entry
127958429         CDS       T08819                                 
Name
(RefSeq) ataxin-2-like isoform X1
  KO
K23625  ataxin 2/2L
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127958429
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127958429
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 127958429
NCBI-ProteinID: XP_052413247
LinkDB
Position
B5:29572301..29592872
AA seq 1099 aa
MSMKPQAGGNRKPGGSNSGAAAASGTGGAGGGVGRQNVGRGRNNAKGPSTAVALSGVYAN
MRMVHVLTSVVGTKCELKVKNGLIYEGVFKTYGPECDIVLDAAHRKSVEPNVSPRREDIV
ESIIFKSSDVVVVHFKDVDLNYAKKVSSDADNFTDSAVSARLNGEHKEKDLEPWDGGEQH
ILGSMESLDTDLSNGWDPDEMFKYNEETYGVKSTYDSSLSSYTVPLERDNSEEFLKREAR
ASQLAEEIEASATYKARVALENDDRSEEEKYTAVVRGERELHSLNRENKYIPPSQRNREP
GMSWGAGRQNSPRMVQCSPGPPPPRSGPHDYNAMDQRVVNGGAHPWPSRCPSPSSRPPSR
YQSGPTNSLPPRVATPTRPPSRPPSRPSRPLSHPSAHGSTGPLSIMPKRLSSEGPPRMSP
KSQRTPRPHRVASCRGGDYMSQGASVDVSAPPPTRNSPSGGTWSSVVSGAHRPRSPRQNS
IGGGAPSPSCLSSPQAGTVPVDSVTASTAATSPTAANPATNLEASTIEEAKESRVLEMRQ
NSPNANKENVKPIEASASIARSVGKGPPSMALDQRKQIDNLKKFSVEFRLQSCSNPDAVF
EPMMAKTPRDLVEKPKDQAAEKSTVDSTGPKVPMESAISEETSTSVSGGPTGSKSGTPSL
SPSSAVPEQKRGPDVMSQGFQTSSSLANAAAKDQDEKEEKNDPVAESVRKSTLNPNAKEF
NPRIFCSPPKPATTPTQTRPQGQPSPSIVVQQPPAVYGQTMFQMYPLTPVSPGVQKSIIW
KPPAMYHVQVPHMTMSQTKPYRPGKVPNMPQQRPDQHHPPGTSTMMHPATAAGPPIVAPS
PAYSTQYFTCSPQQFASQPLVQQMPHYQSQAQHVFSPMIQSGARMITPPGHAQPSLVSSS
TTQYGEQTHTMYVSPTPIPQQFPHPGSTFHPHPQHPQPSATPTGQPQQGTQHGGSHPAPS
PVQHPQHQAAAQAIHLGNPPQQQMYSALAPTPPSMTPGPNPQSPQGSYPSAQQAVYIHPQ
QMQHGYNPNHMAHVQQAHMQSGMVPPHHGTPSHPPTMMLMATQAPAGPQPGALNPIPVSS
ATHYSYTLTPVQGHHPQQL
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgtccatgaagccgcaggccggtggtaatcgcaaacccggcggaagcaacagcggagcc
gccgcggcctccggtaccgggggagcaggaggaggcgtcggacgccagaacgtcggaaga
ggacgcaacaatgccaaaggaccctccactgcagtggccctcagtggagtttatgcaaac
atgaggatggttcatgttttaacctcagttgtgggtaccaaatgtgaacttaaagttaaa
aatggtctgatctatgaaggagtttttaagacctatggcccagagtgtgacattgtcctg
gatgctgcacacaggaagagtgtagaacctaatgtgagcccccgccgtgaggatattgtg
gagagcatcatcttcaagtcctcagatgttgtggtagttcatttcaaagatgtggacctc
aactatgccaagaaagtctcatcagatgcagacaacttcacagacagtgcagtaagtgcc
cgtctgaatggagagcacaaagagaaggatctggaaccctgggatggaggggagcagcac
atcttgggcagcatggaatctcttgacactgatctgtcaaatggctgggatcctgatgag
atgtttaaatacaatgaggagacatacggtgtgaagtccacctatgacagcagcttgtcc
tcatacacggttcctttggagcgagacaattctgaggagttcctcaagcgggaggctcgt
gcatcccagctggcggaggagatcgaagccagtgccacctataaggcccgcgtggctctg
gaaaacgacgaccgctctgaagaagagaaatacactgctgtggttcgtggagagagggag
cttcacagcctcaacagggagaacaaatacattccccctagtcagaggaacagagaacca
gggatgtcatggggagctggtcgtcagaactcacccagaatggtgcagtgcagccctggg
ccacccccacccagatctggacctcatgactacaacgcaatggatcagcgcgtggtcaat
ggaggtgcacacccttggccctcacgctgcccatctccctcctctcgccctccatcccgt
taccagtcaggccccaccaactctctcccgccccgggtggccacgcccacccggcctcct
tccagacccccatccaggccctctcggcccctgtctcacccctctgctcatggctctaca
gggcccctgtccatcatgcccaaacgcctgtcctcagaaggtcctccaagaatgtctccg
aagtcacagcgcactcctagacctcatagagtggcctcttgtcggggcggtgattatatg
tcccagggtgcatcggtggatgtttcggctccccctcctactcgcaacagtccttctggg
ggaacctggtcatctgttgtcagcggtgcacacagacctcgatcacctcgacaaaatagc
attggtggaggtgctccaagcccctcctgcttgtcttcccctcaggctggtacagtgcca
gtagactctgtgacagcttccacagcagcgacgtcacccacagcagccaatccggctacc
aacctggaagcatctacaattgaagaggccaaagaatcaagagtactagagatgagacag
aattctcccaatgccaacaaggagaatgtgaaacctatcgaagcttctgcaagcatcgcc
cgatccgtcggaaagggacctccaagcatggctctggaccagaggaaacaaatagataat
ttaaagaaattcagtgtagagtttaggttgcagtcttgctcaaatccagatgcagttttt
gagcctatgatggccaagactccacgggacctcgtagaaaagccaaaggatcaagcagct
gagaagagcacagtagattcaacaggacctaaagtccccatggagtccgccattagtgaa
gaaacctccacttctgtgagcggcggcccaacaggaagtaaatctggtaccccttctctt
tctccttcctctgctgtacctgagcagaaacgagggcctgatgtgatgtctcagggcttt
caaacctcctcgtctctggccaatgctgctgcaaaagaccaggatgagaaggaggagaag
aatgaccctgtagcagagagtgttcgaaaatctactctcaatcccaatgccaaggagttc
aacccaaggatattttgttcccctcctaaaccagcaacaacccccactcaaacccggccc
cagggtcagccgagcccttccatagtagtgcagcagccccctgccgtctatggccagacc
atgttccagatgtaccctctgacgcctgtcagtcctggcgttcagaaaagcattatctgg
aagcctccagccatgtaccatgttcaggttcctcacatgaccatgagccagaccaagccc
tacagaccaggtaaagtaccaaacatgccacagcagagaccggaccagcatcacccacct
ggcacgtctacaatgatgcatccagctacagctgctgggccgcccatcgtggcaccgagc
ccagcctactccacccaatacttcacttgtagcccccagcagtttgctagccaacctctg
gtacaacagatgccccactaccagtcacaggcccagcatgtgttcagtccaatgatccag
agcggtgcgaggatgatcacccctcctggccatgctcagcccagcctggtttcctcctcc
accactcagtatggtgagcagacgcacactatgtatgtgtcacctacccccattcctcag
cagtttccccacccaggctctacttttcaccctcatccgcagcaccctcagccctctgcc
accccgacaggacaaccgcagcagggtactcagcatggaggcagccacccggcccccagc
cccgttcagcatcctcagcaccaagcggcagcccaagccatccatctgggaaacccacca
cagcagcagatgtactcagccctggcacccaccccgccctccatgacccccggccccaac
cctcagtctcctcaaggcagttacccctccgctcagcaggctgtctacatccacccccaa
cagatgcagcatgggtataaccctaaccatatggctcatgtgcagcaggcccacatgcag
tccgggatggtgcctccccatcatggcactccttcccacccccccacgatgatgttgatg
gccacacaggctcctgctggcccccagcctggtgctctcaaccccatccctgtgtcctca
gccacacactactcctacactctcacccctgtgcaaggtcaccatccgcagcagctgtag

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