Carassius gibelio (silver crucian carp): 127958448
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Entry
127958448 CDS
T08819
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127958448
04020 Calcium signaling pathway
127958448
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127958448
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127958448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127958448
NCBI-ProteinID:
XP_052413279
LinkDB
All DBs
Position
B5:35792877..35888811
Genome browser
AA seq
2362 aa
AA seq
DB search
MARFEDDLPTRYGGGGSPAGPGRGASRLPGPPGGPRVYKQTMAQRARTMAIYNPIPIKQN
CFTVNRSLFIFSEDNIIRKYAKKITEWPPFEYLILATIIANCIVLGLEQHLPALDKTPMS
KRLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTVVGPDFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMG
KFHRTCFRNDTGEQAADFPCGLEPPARVCEGDTVCREYWTGPNFGITNFDNILFAVLTVF
QCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEK
RQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKEDGAWYKRKCNNPVLKRA
KKSKNDLINAEEGEDHFTDISSVAPQGSPFTRTSVKSSKNESSSYFRRKEKRFRFFIRRM
VKAQSFYWTVLCIVGLNTLCVAIVHYDQPDWLTYALYLAEFVFLGLFLIEMSLKMYGLGP
RTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNL
VVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQ
VLTGEDWNAVMYHGIESQGGVHRGMFCSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQEL
TKDEEEQEEAISKKLALQKAKEVKEVSPMSAANISITAFIRPNPGALSCSSSNSSSHSPK
EQQRSLKMMSVWEQRTTQIRKHMLASSEALYQEELNPRLTSNLHLRPDMKTHLDRPLVVE
PRCDGPISPHRGWDKPQDVQGEGGTPDERVHPVKETSQSQPPRKHHRHRERPSNETNENG
DTGHGKEGRHHVHHSRSKEHDGTRCKEGKSDRSQSREGGRRHHHQSSVDEGVGGGEREHR
HHHSHRHSREGNGVVSAGKSERRSRQKDGSRSGTREGERCSRGENGGNGGKRRHRPRTSK
AQSTLEGEEQQGNGEQEEDKSHSHRHMDMGGDSLAINPHQPSGGNRWCLDNPEDLDNKQN
IEQTGGMGTHIPVTVTSPPGETTLIPMNSIDSETMPMTEKNLEDLNQSSPRPILPFSSMF
IFSPSNPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANAPRNNVLKYLDYVFT
GVFTFEMVIKMVDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGSHQSVNRGTK
GKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIA
VQLFKGKFFYCTDESKGLEKDCRGLFLDYDKDEVEAQPREWRKYEFHYDNVLWAFLTLFT
VSTGEGWPTVLKHSVDATFEELGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQ
EQGDKALSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQYRLWKFVVSPPFEYSIMIM
IALNTVVLMMKFHDAPDFYDAMLKYLNIVFTALFSMECILKIIAFGPLNYLKDAWNVFDF
VTVLGSITDILVSEIKTTDRLLNLSFLRLFRAARLVKLLRQGYTIRILLWTFVQSFKALP
YVCLLIAMLFFIYAIIGMQVFGNIELNDDTAINRHNNFRTFLQALMLLFRSATGEAWHEI
MLSCLSERTCDPSSSIYGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDS
SILGPHHLDEFIRVWAEYDPAACGRIKYLDMYEMLLHMSPPLGLGKQCPPRIAYKRLVKM
NMPIADDNSVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELATVWPNLSQKTMDL
LVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLQMQQQQQREQAGTGSQNKVRALLEPIL
PLTHMQDQAVNSVDSASEFQAQTRPSSTTLNNGRTHLDNTIKGSSSWASEKSKEVPRPKR
RPMSRGQSEDASNENTAQELVEMRKMENSANTVTSGSLEGQGRAVSMPKLNAEMQRSHSR
HSPGTLLETIPDSPMRRSASTFAPQRPQEVNLNDYTLAKPVQERHHHHHHHHRCHHRRDK
DKKQRSLDRSPTGQHKATGTAADPVEERSHDRGRSHERKHHSSSAEKQRYYSCDRYGSRE
HCPSKSAVASCATSPSETQEASLNKQGSGWAKGSPVLLTSGASTPSRGRRQLPQTPLTPR
PSVTYRTANSSPVQFLGTQAGLLSPSPGRLSRGLSEHNALLHSGSISSSPAPVSRINSEP
FLGPPDHPAGLQFEAFAVFQEDPSPQTGRFAQTVGMPIVVIPPPPQQQFRRVPNGYHFIT
GPGASRGRARQYYPEAEMDEWC
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttcgaagacgatctcccgacccggtatggaggtggtggctctccagcgggt
ccaggcagaggggccagccggctcccaggccccccgggcggaccgagggtgtataagcaa
acaatggcccaaagagcccggacaatggccatatacaacccgataccgatcaaacagaac
tgtttcacagtcaaccggtccctgttcatcttcagcgaagataatatcattcggaaatat
gcaaagaaaataacagagtggcctccatttgagtacttgattcttgccaccattatagca
aactgcattgtactgggtttagagcaacatttaccagctttagacaagacacccatgtca
aagcgactggatgacactgaaccctacttcatcggaatattttgctttgaggccgggatc
aagatcatcgctctaggctttgcttttcataaaggctcctacctccgcaatgggtggaat
gttatggactttgttgtcgtgttgacagggattctgaccgtagtggggccagactttgat
ttgcggacactcagggcagtaagagtcttgcggccactcaaactggtgtctggaattcca
agtctccaagtggttctgaagtccatcatgaaagcaatggttcctctgcttcagatcggc
cttctgctcttttttgccatactcatgtttgccatcattggcctagacttctacatgggc
aagtttcaccgcacctgcttcagaaacgatactggggaacaggcagctgactttccatgt
ggattggaacctccagctcgggtgtgtgaaggtgacacagtttgtagggaatactggact
ggtccgaacttcggtataacaaattttgacaacatcctgttcgctgtgctcaccgtcttc
cagtgcatcactatggaaggatgggtggacatcctttacaatgccaatgatgcctcaggg
aacacctggaactggctctacttcatccctctcatcatcatcggctctttcttcatgctc
aacttggttctgggggtgctgtcaggggagtttgcaaaggagcgagagcgtgtggagaaa
aggcaggagtttctgaagcttcgcagacaacagcagatcgagagggagctgaccggctac
ctggagtggatctgcaaagcagaggaagtaatgcttgctgaagaagataaaaatgcagag
gagaaggaggatggggcctggtacaagaggaaatgcaacaacccagtattgaagagagcc
aaaaagagcaaaaatgacctcatcaatgcagaggaaggagaagaccacttcactgacatc
tcatcagtcgctccccagggctctccattcacccgtacgagtgtgaagagcagcaagaac
gagagctcttcatacttccgcagaaaagagaagaggtttcgcttcttcatccgccgtatg
gtgaaggctcagagcttctactggactgttctgtgtatagtgggactgaacacattgtgt
gtggctatagttcactacgaccagcccgactggctcacatatgcactgtatttggcggag
tttgtgttccttggtctgtttctaatagagatgagtctgaagatgtatggcctcgggccc
aggacctactttcactcctcatttaactgctttgactttggggtgattgtaggtagcatt
tttgaggtgatttgggcagcagtgaaaccaggagcctcttttggcataagtgtgttgcga
gcgctgcgtttgctgaggatattcaaggttaccaagtattggaactcgttaaggaatctg
gtggtgtctctgctcaactcaatgaagtccatcatcagcctcctgttcctgctctttctc
ttcattgtagtgtttgctctgctgggaatgcagctcttcggaggacagtttaattttgaa
gatgagaccccgacgaccaactttgacacattcccagctgctatcctgacagtgtttcag
gttctgacaggagaagactggaatgctgtgatgtatcatggaattgaatcccagggagga
gtgcaccggggaatgttctgctccgtgtacttcattgtgctcacactctttggaaactac
actctcctcaatgtctttttggccatcgctgttgataatctcgccaatgcacaggaactc
accaaggatgaggaggagcaggaggaagccatcagtaagaaactggctctgcagaaagcc
aaggaggtaaaggaggtcagccccatgtcggccgctaacatttccatcacagcttttata
aggccaaatcctggtgctctttcatgcagctcctccaactccagctctcattcacctaaa
gaacagcagcgttctctaaagatgatgtccgtgtgggagcagcgcaccacgcagattcgg
aagcacatgctggccagcagcgaggcattgtaccaagaggaactcaacccccggctgacc
tccaaccttcacctccgccctgacatgaagacccacctggaccgacctctggtggtggaa
cctcgttgcgatggtcccattagtccccacagaggctgggacaaaccccaggatgtgcaa
ggggagggcggcacaccagatgaacgagtccatcctgtaaaggagacatcacagtcacag
ccaccacgcaaacaccaccgtcacagggagcggccctccaatgagaccaatgaaaacggc
gacacaggtcatggcaaagaaggccggcatcatgtgcatcacagccgcagtaaggagcac
gatgggacacggtgtaaggaggggaagagtgacaggagccagagcagagaggggggccgc
agacatcaccatcagagctcagtggatgagggagtgggaggtggggagcgggaacatcgt
caccatcactctcataggcatagcagagagggcaatggagtagtcagcgcagggaagagt
gaacggcggtccaggcagaaggatggctcacgttcaggaacaagggagggggagaggtgc
tccaggggcgaaaatggaggtaatggagggaagagacggcacagaccacgtaccagtaaa
gctcagtcgacactggaaggagaagagcaacaagggaatggagagcaggaggaggacaag
tcacacagtcataggcacatggacatgggcggagattcattggctataaacccccatcaa
ccttcaggtgggaaccgatggtgtcttgataatccagaagacttggacaataaacaaaat
attgaacagactggaggaatgggcacacacatacctgtgaccgtcacatctccccctgga
gaaaccacccttattcccatgaacagtatagacagtgagacaatgcccatgactgagaag
aatctggaggatctgaaccagagcagccctcgtcccatcctccctttcagctctatgttc
atcttcagcccatccaatccggtgagacgtctgtgccactacattgtgagcctgcgctac
tttgagatgtgtatcctggtggtgattgccatgagcagtatagccctggctgcggaggac
ccagtccaagccaatgcccctcgcaacaatgtcctgaagtatttggactatgtcttcact
ggtgtcttcacatttgagatggtcattaagatggtggatttaggtttattgctgcatcct
ggtgcctacttcagggatctgtggaacattctggacttcattgtggtcagtggtgcactg
gtggcattcgcattctcgagcttcatgggatcacatcaaagcgtaaacagaggaaccaag
ggaaaagacatcagcactatcaagtccctgagggtgttgcgagtcttgcgaccactgaag
accattaaacgtctacccaaactgaaggccgtgttcgactgtgtggtgaactccctgaag
aacgtgttgaatatcctcattgtctacatcctgttcatgttcatcttcgctgtcattgct
gtgcagctcttcaagggcaagtttttctactgcacagacgagtccaaaggcctggagaaa
gactgcagagggctgttcttggattacgataaggatgaagtggaagcccagcccagggaa
tggaggaaatatgagttccactacgacaatgtgctgtgggcgtttctcactctcttcacc
gtttctactggagagggttggccaacggttttgaagcactctgtagatgccacttttgag
gagctgggtcccagtcctggctaccgcatggagatgtccatcttctacgtggtctacttt
gtggtcttcccctttttcttcgtcaacattttcgtggccttgataatcatcacattccag
gaacagggtgataaggccttgtcagagtgcagtttggagaagaatgagagagcctgcatc
gactttgctatcaatgccaaaccgctgacccgctatatgccacagaaccagcagtccttt
cagtaccgcttgtggaagtttgtggtctctccaccatttgagtactccatcatgatcatg
attgctctcaacactgtggtgctcatgatgaagttccatgatgcacccgacttttatgac
gctatgctcaagtatctcaacattgttttcactgctctcttttcaatggagtgtattctc
aagataattgctttcggccctttgaattacctgaaagacgcttggaatgtgtttgacttt
gtgacggtgctgggcagcatcactgacatcttagtctctgagattaaaactacggaccgt
ctgttgaacttgagtttcctgaggctcttcagagcagccagactcgtcaaactcctccgg
cagggatacaccattcgcatcctgctctggacattcgtccagtcttttaaggcactgcct
tatgtttgccttctaatcgccatgctgtttttcatctacgccattattggaatgcaggtg
tttgggaacattgagttgaacgatgataccgccatcaatcgtcacaacaactttcgcact
ttcctccaagcacttatgctgttattcaggagtgccactggtgaagcctggcatgagatt
atgctgtcctgtctgagtgagcgcacctgtgatccaagctcaagcatttatggaaaggag
tgcgggagtgactttgcctacttctactttgtctcgttcattttcctctgttctttcttg
atgttgaacctgtttgtggctgtcattatggacaactttgaatatctgacacgcgactcc
tccatcttgggccctcaccacctggatgagtttatccgagtgtgggcagagtatgaccca
gccgcatgtggccgtatcaagtacctcgatatgtatgagatgctgctccacatgtcccca
cctttaggtttgggaaagcaatgccctccacgaatcgcctacaagcggctggtgaaaatg
aacatgcccattgcagatgacaacagtgtgcacttcacctccaccctgatggctctgatc
cgcacagccctggagatcaaactggcttcaggcatggtggcccaacgcttgtcagatgct
gaactgaagaaggagctcgctacagtctggccaaacctgtctcagaagactatggacctg
ctggtcacgccgcacaaacccaatgagcttacagtggggaaggtatatgcggctcttatg
atttttgactattacaagcaaaacagagccaaaaggcttcagatgcagcaacagcagcag
agagaacaggcaggaactggatctcagaataaagtcagagctcttctagagcctattctc
ccactgacccacatgcaagatcaggctgttaacagtgtagattcggcctcagagtttcaa
gctcagaccagacccagctccaccacgctcaacaatggacgcacacaccttgataacaca
ataaagggatcttcatcctgggcctcggagaagtccaaggaggtcccccgacctaaacga
cggccaatgtccagaggtcaatcagaggatgcctcaaatgaaaacactgcccaggagtta
gtagaaatgaggaagatggagaacagtgccaacacagtgacctctggcagccttgaaggc
caaggacgtgccgtatccatgccaaaactcaacgcagagatgcagaggagtcattcccgt
cattctcctgggactttactggaaaccattcccgattcccccatgagacgctctgcgtcc
acttttgcaccacagcgccctcaggaggtgaatctgaatgactacactttggcgaaacct
gttcaagaacgacatcaccaccatcaccatcatcaccgatgccatcatcgtagggacaaa
gacaagaaacagagatctctggacaggtcgcccacgggacaacacaaagccacaggcaca
gcagctgaccctgtagaggagaggtcacatgacagaggtcgttcccatgagcggaagcat
cattcgtcttcagcggagaagcagcggtattactcatgtgatcgctacggcagtcgggaa
cactgtcccagcaagtctgccgtggcaagctgtgccacctcacccagcgagacccaggag
gccagtctcaacaagcagggcagtgggtgggctaaggggagcccggtgttgttgacctca
ggggcgagcactccgagccgtgggcgcagacagctgccccagaccccccttactcctcgt
ccctccgtgacctacaggactgccaactcctcccctgtgcaatttctgggcacacaggcc
ggcttgctttccccgagtcccggcaggctgagccgcggtctgtccgagcacaacgccctc
ttacacagcggctccatctccagctcgccggcccccgtcagtcgcattaactcagaaccc
ttcttggggcccccggaccaccctgccggcctccagtttgaagccttcgccgtcttccaa
gaggatccgagccctcagacgggccgttttgcccagactgtagggatgcccattgtggtg
attcccccacctccccaacaacagttccgcagagttcccaatggataccacttcatcacg
ggccccggggccagcagaggaagggcaaggcagtactacccagaggcagagatggacgag
tggtgctag
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integrated database retrieval system
