Carassius gibelio (silver crucian carp): 127958492
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Entry
127958492 CDS
T08819
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127958492
04518 Integrin signaling
127958492
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127958492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
127958492
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127958492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
DUF7949
EGF
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
hEGF
NDNF
Motif
Other DBs
NCBI-GeneID:
127958492
NCBI-ProteinID:
XP_052413333
LinkDB
All DBs
Position
B5:36178225..36208344
Genome browser
AA seq
1875 aa
AA seq
DB search
MGMPGLLLACMAVAMLVHLSSAGLVKRVIRHRRESLSPTTENLTLPSPDQPVVFNHVYNI
NVPSGSLCSVDLDSPGTTPVKPKPANVQSDQHIEHTMDGENQIVFTHRINIPKKACGCDN
HMPDLKDLLNRLEMLEAEVSSLREQCTSGTGCCGAQVTAGEVTTKPYCSGRGNYSTETCS
CVCEPGWKGVNCSEPECPNFCQDQGRCEDGKCICFEGFGGEDCSSELCPVDCSENGECID
GACICAEGFIGEDCSFTNCLNNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCYDRGRC
DNGTCYCEEGFTGEDCGELTCPKNCNHRGRCVNGQCVCNIGYSGDDCSRLTCLNDCNQRG
HCFNGKCICDPGFEGEDCSILSCPENCNDRGQCINGECICDDGYEGDDCSELSCPNNCHD
RGRCVNGKCICKVGFTGEDCNIKTCPHDCHGHGECVDGKCICHNGFAGEHCGIKTCPHDC
HGHGECVDGKCICHNGFAGEHCGIKTCPHDCHGHGECVDGKCICHNGFAGEHCGIKTCPH
DCHGHGECVDGKCICHKGFAGEHCGIKTCPHDCHGHGECVDGKCICHDGFAGEDCSIKTC
PNDCHERGQCVDGKCVCDDGFAGEDCSIKTCPNDCHERGQCVDGKCVCHVGFTGHDCSEL
TCPNDCHNRGLCVNGQCVCNSGFTGEDCGTKTCPNNCLDRGYCEDGKCVCSEGYTGEDCS
VLTCPANCNDQGQCLNGMCICDLGFTGDDCSEISPPRDLTVTEVDPETVDVAWVNEMLVT
EYLITYVPTTPGGLEMEMRVSGEKKTATISDLEPGIEYLISVFAVLNSKMSVPVSARIAT
HLPEPEGLKFKSVRESSVEVEWDPLNIPFDGWNLIFRNTKEEDGEILNSLTAPETTFEQS
GLGPGQEYEVKLEVVKNNTRGPPASKNVVTMIDAPSQVDVRDVTDSTALITWFQPVAQVD
GISVSYGPITDIDRKKIELSSMDTQYHLAELNPDTEYEVSLMARRGELTSFPVSETFTTD
LDAPSNLKAVEQTDESITLEWKNSISDVLNYRVKYGPLSGGEHGELVFPSGPQDTTQAKI
TGLRPGTEYGMGVTSIKEERESMPATTNAVTDIDSPKDLEVSETTETTLVLVWRRPVAKI
DNYVLVFTSADGTETELEVPLTVNTYTLTDLNPGMLYTISLSAKRGRKMSAPATLSASTD
EEKPQVGNITISDVSWDSFSMSWELDRGEVESFLVEVSDPDGLSDGQNHTLSSQEFSLAV
TDLSPSTFYRVTLYGLYKGELLDPVFAEAITEAEPEVEHLSVSDNTPHSFKLTWTAPDGI
FDTFTIKVGDSNALGQPLQLSVSGDKRTEAVTGLKEDTEYDIELFGIISGRKFKPLLSVA
RTGLGTPKEIRFSDVTDTSATVHWTLPRTHVDSYRVTYVPIQGGSPMTLRVDGGESQAML
PNLTPGVTYQVTVIAVKGLEESEPGSDRVTTALDKPRGLTAVNITDTEALLLWQPSIATV
DGYVITYSADSVAPVMERVSGNTVEFEMSSLTPATLYTVKVYAVREAAKSAATSTEFTTD
VDAPQNLAASNIQTESAMLTWKPPRADISGYILSFESADGIVKEVVLSPTATSYSMTQLT
SSTEYTVRLQAIAGPKRSKIISTVFSTIGVLYKHPKDCSQTLLNGETTSGLYTVYLRGDE
SQPLQVYCDMTTDGGGWIVFVRRQSGKVEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITS
SGQYELRVDLRDKGESAYAQYDKFSVSEPRSRYKVHVGGYSGTAGDSMTYHHGRPFSTYD
NDHDIAVTNCALSYKGAFWYKNCHRVNIMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKI
RPANFRNFEGRRKRS
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggggatgccaggcctgttactggcctgtatggcagtagccatgttagttcatctctct
agtgctggtctggtaaaaagagtaattagacacagaagagaatcactgtcaccgaccact
gagaacttgaccctcccaagtcctgatcagcctgtggttttcaatcatgtatacaacatc
aatgttccctctgggtccctgtgctccgtggacttggattcacctggaacaacaccagtg
aagccaaaaccggccaatgtgcagtctgaccaacacatagaacacaccatggacggagag
aatcagattgttttcacgcataggattaacattcctaagaaagcttgcggttgtgataac
cacatgcctgacctgaaggatcttctgaacaggctggaaatgctggaggcagaggtgtcc
agtctaagagagcagtgcaccagtggaacaggctgctgtggtgctcaggttacagcaggt
gaagtcacaaccaaaccctactgcagtggccgtggaaactacagcactgagacctgcagc
tgtgtgtgtgagcccggttggaagggagtcaactgctctgagccagaatgccctaacttt
tgccaggatcaaggccgctgtgaagatggcaagtgcatctgcttcgagggcttcggcggt
gaggactgcagcagcgagctgtgccctgtggactgcagtgagaatggagaatgcatcgat
ggggcttgcatctgtgctgagggcttcatcggtgaggactgcagttttaccaactgccta
aacaactgcctcggcagggggcgctgtgtggatgacgaatgtgtatgtgacgagccttgg
acaggctttgactgctctgagctcatctgtcccaacgactgctacgaccgtggccgctgt
gacaatggaacctgttattgtgaagagggctttactggggaggactgtggggagcttacc
tgccccaaaaattgcaatcaccgtggcaggtgcgtaaatggacagtgcgtctgcaacatt
ggctacagcggagatgactgctccaggctaacctgcctcaatgactgcaatcagagaggg
cactgcttcaatgggaagtgcatatgtgatcctgggttcgagggtgaggactgcagcatt
ctttcctgccctgaaaactgcaatgacaggggacagtgcatcaacggtgagtgtatttgt
gatgatggatatgaaggtgacgactgctctgagctttcttgccccaataactgtcacgat
cgtggccgatgcgtcaacgggaagtgcatttgcaaagttggctttaccggagaagactgc
aacatcaagacctgtccccatgactgccatggacacggagagtgtgtggacggcaaatgc
atttgccacaatggctttgctggagaacactgtggcatcaagacctgtccccatgactgc
catggacacggagagtgtgtggacggcaaatgcatttgccacaatggctttgctggagaa
cactgtggtatcaagacctgtccccatgactgccatggacacggagagtgtgtggacggc
aaatgcatttgccacaatggctttgctggagaacactgtggcatcaagacctgtccccat
gactgccatggacacggagagtgtgtggacggcaaatgcatttgccacaagggctttgct
ggagaacactgtggtatcaagacctgtccccatgactgccatggacacggagagtgtgtg
gacggcaagtgcatttgccatgatggttttgctggtgaagattgcagcatcaaaacctgt
cccaatgactgccatgagcgtggacagtgtgtggatggcaagtgtgtttgcgatgatggt
tttgctggagaagactgcagcatcaaaacctgtcccaatgattgtcatgagcgtggacag
tgtgtggacggcaagtgtgtttgtcatgttggttttacaggccatgattgcagcgaattg
acttgccccaatgactgccataacagaggactttgtgtaaatggccaatgtgtgtgtaac
agcgggttcactggggaggactgtggtacaaagacgtgccccaacaactgtctggaccgt
ggctactgtgaagatggaaagtgtgtctgctccgagggctacaccggtgaagactgctct
gttctcacctgcccagcaaactgcaatgatcaaggccaatgtctgaatggaatgtgcata
tgtgatttaggcttcactggcgacgactgctctgaaatctccccacccagagacctgact
gtgactgaggtcgatccagaaacagtggacgttgcctgggtcaatgagatgcttgtgacg
gagtatcttatcacctatgtgcctacgactccaggcggtttagagatggaaatgagagtt
tccggtgaaaagaagacagccactattagtgatctcgagcctggcatagagtacctaatc
agtgtctttgctgtcctgaacagcaagatgagcgtccctgtcagtgccagaatagccaca
catcttcctgaacctgagggtctgaaattcaaatcggttagagagtcctcagtggaggtt
gaatgggaccccttgaacatcccgtttgatggctggaacctcatcttcagaaacacaaaa
gaagaggatggagagattttgaactctctcaccgctcctgagaccacctttgagcagtct
ggtcttggacctggacaagagtatgaagtcaagcttgaggtggtaaagaacaacactcgt
ggaccaccagccagcaagaacgttgtcacaatgattgatgctcccagtcaggtggatgtg
cgtgatgtgacagacagtacagcccttataacctggtttcagcctgtagctcaggtggat
gggatctctgtgtcctatggtccaatcacagatatagacaggaaaaaaatcgagctttcc
tccatggatacccagtaccatctggctgagctgaaccctgacaccgagtatgaggtctct
ctcatggcccgcaggggagagttgaccagctttccggtctcggagaccttcacaacagac
cttgatgcccccagcaacctcaaggcagttgaacagacagatgagagcataactctggag
tggaaaaacagcatatctgatgtcctcaattaccgcgtcaaatacggcccactttctgga
ggggagcacggagaactggtcttccccagcggcccgcaagataccactcaggctaaaatc
actggccttaggcccgggacagagtatggaatgggtgtgacgtcaatcaaagaagagcgt
gagagtatgcctgctacaaccaatgctgtgactgatattgactctcccaaagaccttgaa
gtaagtgaaaccacagagaccacattggtactggtttggaggaggccggtcgccaaaatc
gacaactatgtgctagtctttacatctgcggatggcacagaaactgaattggaggtacct
cttactgtcaatacctacaccctgactgacctgaatcctggaatgctgtacaccatcagt
ctatctgccaagagaggaagaaagatgagtgcgccagccactctgtcagcatccacagat
gaagagaagcctcaggtgggcaacatcaccatctctgatgtgtcctgggacagcttcagt
atgtcctgggagctggacagaggagaggttgagagctttctggttgaagtatctgaccca
gatggcttatctgatggtcagaaccacactttatccagtcaggagttcagcctggctgtc
actgacctctcccctagtactttctacagggtcacactgtatgggctgtacaagggagag
ctcttagatcctgtctttgctgaagccatcacagaagctgaacctgaagtggagcatctc
tcggtctcagacaacaccccgcacagctttaaactgacatggacagcaccagacggcatc
tttgatacattcactatcaaagtcggggattctaacgccctgggtcaacctctccagttg
agtgtgtctggagacaagcgaacagaagcggtgacaggtctcaaagaagatacagagtat
gacatcgagctctttggaatcatttcgggacggaaattcaagccccttttgtctgtagca
cgaacaggtctgggaacacccaaggagatacgcttttctgatgtgactgatacatcggcc
actgttcactggactttgccccgtacccatgtagacagctaccgggtcacctatgtgccc
attcagggtggcagccctatgacactgagagtagatggaggagagtctcaagccatgctg
cctaatctgacccctggagtgacctaccaggtcactgtcatcgctgtgaagggcttggag
gagagtgaaccaggatctgatagagtcacgacagccctggataaaccacgaggtctgaca
gcagtcaacatcaccgacactgaagctctgctgctgtggcagccgtccattgctactgtg
gatggatatgtcatcacttacagcgcagacagtgtggctccagtgatggaacgggtgtct
gggaacactgtggagtttgagatgagctccctcacacctgccaccctgtacactgttaaa
gtttatgctgtcagagaagcagccaagagcgctgcaaccagcacagagttcaccacagat
gtcgatgcccctcagaatctggctgccagtaatattcaaacagaaagtgctatgttgaca
tggaagccaccaagagcagacatcagtgggtacatcctcagctttgagtctgctgatggc
attgtcaaggaggttgtccttagccccacggcaacatcttacagcatgactcagctgact
tcctccactgagtacacagtcagactgcaggccatcgctgggccaaagagaagcaaaatc
atctcgacagtcttctccaccattggagtgctatacaagcatcctaaagactgttcgcag
actctgttaaacggagaaacaacctcaggcctgtacactgtttacctgcgtggagacgag
agtcagcctctgcaagtctactgtgatatgaccactgatggaggcggctggattgtgttt
gtgagacgacagagcggtaaagtggagtttttcagaaactggaagaactacactgcaggc
ttcggtgacctgaatgatgaattctggttgggtctctctaacctccataagatcacctcc
tctgggcagtatgagctgcgtgtggacctcagagataagggcgagtctgcatatgcgcag
tatgacaagttttcagtctcagaaccacgcagtcgctacaaagtgcatgttggaggatac
agcggcactgcaggtgactcaatgacgtatcaccacggccgtccattctcgacctacgat
aatgaccacgatatagctgtcaccaactgtgctctgtcttacaagggagctttctggtat
aaaaactgtcatcgagtgaatataatgggacgatatggagacaacagtcatagcaagggt
gtaaactggttccactggaagggtcacgagcactctatcgagtttgcagagatgaagatc
aggcccgccaacttcaggaattttgagggaaggagaaagcgatcgtaa
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