Carassius gibelio (silver crucian carp): 127958499
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Entry
127958499 CDS
T08819
Name
(RefSeq) homeobox protein orthopedia B isoform X1
KO
K24901
homeobox protein orthopedia
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127958499
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
127958499
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
CCDC106
Motif
Other DBs
NCBI-GeneID:
127958499
NCBI-ProteinID:
XP_052413339
LinkDB
All DBs
Position
B5:25446916..25450320
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AA seq
327 aa
AA seq
DB search
MLSHADLLDTRLGELSPPNSGLQLHWMKDAAAELLGHREALKCRLAGTDSGHPGDLTSAT
ETVEGTTLLPGEDISNGGSNPNGMQQVNTKDQEKQQQQNSNNQSGGQQNQQKQKRHRTRF
TPAQLNELERSFAKTHYPDIFMREELALRVGLTESRVQVWFQNRRAKWKKRKKTTNVFRA
PGTLLPTHGLPQFPSAAAMGDSLCSFHANDTRWATAGMPGVSQLQIPPGLGRQQAMAQSL
SQCSLGAGPPPNSMGLSSSLSSNGSGLQSHLYQPTFPGMVPASLSGPTNVSGSPQLCSSP
DSDMWRGTSIASLRRKALEHTVSMSFT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcatgccgaccttttggatactcgcctcggtgagttatcgccaccaaactcc
ggtcttcagctccactggatgaaggatgctgcagccgagcttctcggacacagagaggct
ttgaagtgcagactagcggggactgactctggacaccccggcgatcttacctcggctaca
gagactgtggaagggaccactctgctccctggggaagacataagtaatgggggatccaat
cctaatggaatgcagcaggtcaacaccaaagaccaagaaaagcagcaacagcaaaactct
aataatcagtcgggcggccagcaaaaccaacagaaacagaaacgccacaggacccgcttt
actccagcgcagctgaacgagctggaaaggagctttgctaaaacacactaccctgacatc
ttcatgagagaggaacttgcattacgggttggtttaacggagtcacgggttcaggtgtgg
ttccagaatcgacgcgcaaaatggaagaagcgcaagaagacaaccaacgttttccgcgcg
ccgggcactttgctgccaacacacggtctgcctcagtttccgtccgcggctgcgatgggc
gacagtctctgctcttttcatgccaacgacacgcgctgggccacggccgggatgcctgga
gtctcccagctgcagataccgcctgggctgggccgacagcaggcgatggcgcagtccctg
tcccagtgcagtctcggagccggccccccaccaaactccatgggcctttccagcagctta
tcgtcaaatggttccggccttcagtcgcatctgtatcaacccacatttccagggatggtg
cccgcttcgctctcgggtccaacgaatgtgagcggctcccctcagctgtgcagctcgccg
gacagtgatatgtggagagggactagtatcgcttcgctgcgccgtaaagcacttgagcac
accgtttccatgagtttcacctaa
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